Amborella trichopoda: 18431860 Help Entry 18431860          CDS       T02990                                  Name (RefSeq) SWI/SNF complex subunit SWI3C   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism atr  Amborella trichopoda Pathway atr03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:atr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     18431860  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:atr03021]     18431860    03036 Chromosome and associated proteins [BR:atr03036]     18431860 Transcription machinery [BR:atr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      18431860 Chromosome and associated proteins [BR:atr03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     18431860    PBAF complex     18431860    GBAF(ncBAF) complex     18431860 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_3 Zn_ribbon_2 Motif Other DBs NCBI-GeneID:  18431860 NCBI-ProteinID:  XP_006842040 UniProt:  W1P9R5 LinkDB All DBs Position Unknown AA seq 781 aa AA seqDB search MSASPSIPPGIRIKLKRRRENSNGRSFSDDEDSSALPEKQAKDDDSPIMASDSGEPIETS NGNGVQILDFPVVFEQKLARPHPSVLALICAERAVFSHDFREEKTRSHGFFLENISHGQL QTLSSIPCDSPFLTPPDQEKPESSTYVCTSPTIIEGKGVIKRLIMPGMEKECLLVLPVHA EWFSPTKLHRLERHVVPGILSGKSSDLTQERYVEIRNKIVAKYMENPEKMLSLNECEGSI EVDINILSKIFRFLDHWGIINYRATSSSKKSVHHSIRPGSLLQEDNNGELHISLAPLRSI DGLISFDKPKSRFRPEDVSLVSMGSGRAISDLDQRLRERFSENRCSCCGQPCPRIYYQSQ KEADVILCSDCFHDGKFLTGSSSIDFLRMDSTKDFCDFDGDNWTDHETLLLLQAVEIYND NWNEIAEHVGTKSKAQCILQFIRLPMEDGLLEDIELPKSVFSSDYSKEADHGKPYSMANG YSAGEEINSEDRVLFANSGNPVMALVAFLASAIGPRVAAACAHAALVELSKEDDCTVANS SPLNMEVSAQGDRKCLESDRRDPGFRGNDPNIIHQQDDSKSMQGLSGKSESVGSPSSEKL KVAVKVGLSAAAMKAKLFADHEEREVQRLTASIVNNQLRKVELKLKQIAETEALLMRECE QTERHRQRIASERDRIVSSRFSTPDSTTTSTNNNRPIVMTTSTSQQNLMPSYNQQVSHQT MSFMPRQQMFGFGPGTIGPRMPLSAIHPSASPSSAPTSTPQNPSLSHAMLRPVAGASSNA S NT seq 2346 nt NT seq  +upstreamnt  +downstreamnt atgtcggcttccccttctattcctccaggaattaggatcaagttgaagaggaggagggag aacagcaatggcagaagcttctcggacgacgaagattcctctgctcttcctgagaaacaa gccaaagatgatgactctccaataatggcttcggattctggcgagcccatcgagacctcg aatggaaatggggtccaaatcttggactttcctgtggtttttgagcaaaaattggcgaga ccccatccctctgttttggccctaatatgtgcagaaagggcggttttttcccatgatttt agggaggagaaaaccaggtctcatggtttcttcttggagaacatctctcatggtcaattg caaacgttatcaagcattccttgtgatagtccttttctcactcctcctgatcaagagaaa ccagagtcttccacctatgtttgcacttcgccgacaattattgaagggaaaggtgtcatc aagcggcttataatgcctggaatggagaaggaatgtctcctcgtcttgcccgtgcatgct gaatggttttctcccaccaagctccacaggttagagaggcacgtggttccaggcattctg agtggtaagtctagtgatctcactcaagagagatatgtggagattaggaataagattgtg gctaagtacatggagaatcctgagaagatgctctcactaaatgaatgtgaaggatcaatt gaggttgatatcaacatccttagtaaaatttttcgcttcttagatcactggggaatcatc aattacagggctacaagctcatcaaagaagagtgtacatcattctataaggccaggttcc cttcttcaagaggacaacaatggggagcttcatatatctttggccccacttaggtccatt gatggcctaatctcttttgacaagcctaaaagcagatttaggcctgaagatgtttcttta gtatccatgggttctgggcgagcgatttctgatctagaccagaggctacgagagcgtttt agtgagaatcgctgcagttgttgcggtcagccttgccctcgtatttactatcaatcccaa aaggaggctgatgtgatactttgctcagattgcttccatgatggaaagtttcttactggc agctcaagtatagattttttgaggatggattccacaaaagatttctgtgattttgatgga gataactggacagatcatgaaactttgcttttgctccaggcagtggaaatttacaatgat aactggaatgagattgcggaacatgtaggcacaaagtcgaaagcacagtgtattcttcaa tttattcgcttgcctatggaagatgggttgcttgaagatattgagctcccaaagtcagtc ttttcctcagattactccaaagaagcagatcatggcaaaccttattcaatggctaatggt tattctgctggtgaagaaataaattctgaagacagagtcctgtttgcaaattctggcaat cctgtcatggccctggttgcatttttggcatctgccataggtccacgagttgcagcagcc tgtgcacatgctgcattagttgaactgtccaaggaagatgactgcacggttgctaatagt tcccccttaaatatggaagtttccgcccaaggtgataggaaatgtttggagagtgatcgc cgggatcctggatttcgagggaatgatcccaatataatccatcaacaagatgactccaaa tcaatgcaaggcttgtctggtaaaagtgaatcagttggtagtccgtcttctgaaaagctg aaagttgctgtcaaggttggcctatctgctgcagcaatgaaagcaaagttatttgctgac catgaagaacgtgaagtccaaagactgacagcatccattgtaaacaatcagctaaggaaa gttgagctaaaattgaagcaaattgcagagacagaggccttgctcatgagggagtgcgag caaacagagagacacaggcaaaggattgcatcagaacgcgatcgcattgtatcaagccgc ttctccacacccgattcaacgaccacctcaactaataacaacaggcctattgtgatgaca acttcgacttcacaacaaaatctcatgccttcctataatcaacaagtgagccatcaaacc atgtctttcatgcctcgtcagcaaatgtttggttttggaccaggcaccatcgggccccgc atgcctctatctgcaatacacccttcagcctccccatcatcagcacctacttccacccct cagaacccctctctctctcatgctatgttgagaccagttgcgggtgcaagctcgaatgct agttaa

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