Amborella trichopoda: 18431949
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Entry
18431949 CDS
T02990
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18431949
03036 Chromosome and associated proteins [BR:
atr03036
]
18431949
Transcription factors [BR:
atr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
18431949
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
18431949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
Ccdc124
CDC45
Motif
Other DBs
NCBI-GeneID:
18431949
NCBI-ProteinID:
XP_006842123
UniProt:
W1P7A3
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MADGHLFNNILLGGRGGTNPGQLRIHSGGIVWRKQGGGKVVEVGKSDLVGVSWMKVPKSY
QLGVRIKAGLVYKFIGFREQDVNNLNSFISNTLGITPQEKQLSVSGRNFGEIELNGNMLT
FLVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLVELAFHIPNSNTTFV
GDETRPPAQVFRDKIMSMADVGPSGEEAVVTFDGIAVLTPRGRYTVELHISFFRLLGQAN
DFKIQYSSVVRLFVLPKFNQPHTFVIITLDPPIRKGQTLYPHIVLQFETEYVVESTLSIS
EDLLSTKYKDRLEASYKGLLYDVFTAILRGLSGAKLTRPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLILHDEIECLEFERHGAGGSSISSHYFDLLVRLKNEQEHLFRN
IQRNEYHNLFEFINSKGLKITNLGETQATGGVAAVLQNSDDDAVDPHLERIKNSRDGGGD
EESDEEDEDFVADKDDGGSPTDDSGEEGSDASVSGDEEKPKKELKKDAVPKAASVKRKQK
DGDEDGSKKRKQPKKKKDPNAPKRAMSGFMFFSQSERENLKKNNPGMSFTDVGRALGDKW
KKMTSEEKEPFEAMARADSKRYKEAMAGYKSAPTNIDSGNESDSE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtcacctcttcaacaatatccttcttgggggccgtggtggaactaatcca
gggcaactcagaattcactctggtggtattgtttggcgaaagcaaggcggtggaaaggtt
gttgaagtcggaaaatcagatttagtgggtgtaagctggatgaaggttcccaagagttat
cagcttggtgttaggattaaggctgggctagtctataaatttattggctttcgtgaacag
gatgtcaataacttgaatagttttatttcaaacactcttgggataacgccccaggagaaa
cagctgtctgtcagtggtcgcaactttggagagattgagttaaatgggaatatgctaaca
tttctggtgggttcaaagcaagcatttgaagtgtctttagcagatgtgtcgcaaacgcaa
ctacagggaaaaaatgatgtctcccttgagtttcatgtagatgatacgactggagcaaat
gagaaggattctttggtggagttggcctttcatatacctaacagcaatacgacttttgtt
ggggatgaaactcgccctcctgcacaggtcttccgcgataaaattatgtccatggcagat
gttggtccatctggtgaagaagctgttgtgacctttgatgggatcgctgtacttacacca
agagggcgctacactgttgagcttcatatttcattcttccgcctccttgggcaagccaat
gatttcaagattcagtatagcagtgttgttcgtctttttgtgctgccaaagttcaatcaa
cctcatactttcgtcatcattactcttgacccacctattagaaaaggacaaacattatac
ccacatattgttttacagtttgaaacagaatatgtggttgaaagcacgctgtctatttct
gaagatctcttgagcacaaagtacaaggaccgactggaagcatcatataagggattattg
tatgacgtcttcacggctattttgcgtggcttatccggtgcaaaattaacacgaccgggg
aaattccgtagctgtcaagatggatatgcagtgaaatcatcattgaaagctgaagacggt
atcttatatcctcttgaaaagagctttttcttcctgcctaagcctccaactctcatacta
catgatgagattgaatgccttgagtttgagaggcatggtgctggtgggtcaagtatctcg
tcccattattttgatcttctcgtgaggcttaaaaacgagcaagaacatctgtttcggaat
attcagagaaacgagtatcacaacctcttcgaattcatcaactcaaagggattgaagatc
acaaaccttggagaaacacaagctactgggggtgtcgctgctgttcttcaaaactctgat
gatgatgctgttgatccacaccttgagcgtattaaaaattcacgagatggaggtggtgat
gaagaaagcgatgaagaggatgaggactttgttgcagacaaggatgatgggggttctccc
actgatgactccggtgaagagggatcagatgccagtgtgagtggagatgaagagaagccc
aaaaaggaactgaagaaggatgccgttcctaaagctgctagtgttaagaggaaacaaaag
gatggcgacgaagatggttcaaagaagagaaagcagccaaagaagaaaaaggaccctaat
gcgcctaagagagctatgtctggctttatgttcttctctcaaagtgaaagagaaaatttg
aaaaagaacaacccaggcatgtctttcacagatgttgggagggcacttggggataagtgg
aaaaagatgaccagtgaagagaaagagccgtttgaggccatggcccgagctgattcgaaa
cgatacaaggaagcaatggctggttacaagagtgctccaacaaacatcgattctgggaat
gaatctgacagcgagtag
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