KEGG   Amborella trichopoda: 18431949
Entry
18431949          CDS       T02990                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:atr03000]
    18431949
   03036 Chromosome and associated proteins [BR:atr03036]
    18431949
Transcription factors [BR:atr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    18431949
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     18431949
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N Rttp106-like_middle SSrecog HMG_box HMG_box_2 HMG_WDHD1 Ccdc124 CDC45
Other DBs
NCBI-GeneID: 18431949
NCBI-ProteinID: XP_006842123
UniProt: W1P7A3
LinkDB
Position
Unknown
AA seq 645 aa
MADGHLFNNILLGGRGGTNPGQLRIHSGGIVWRKQGGGKVVEVGKSDLVGVSWMKVPKSY
QLGVRIKAGLVYKFIGFREQDVNNLNSFISNTLGITPQEKQLSVSGRNFGEIELNGNMLT
FLVGSKQAFEVSLADVSQTQLQGKNDVSLEFHVDDTTGANEKDSLVELAFHIPNSNTTFV
GDETRPPAQVFRDKIMSMADVGPSGEEAVVTFDGIAVLTPRGRYTVELHISFFRLLGQAN
DFKIQYSSVVRLFVLPKFNQPHTFVIITLDPPIRKGQTLYPHIVLQFETEYVVESTLSIS
EDLLSTKYKDRLEASYKGLLYDVFTAILRGLSGAKLTRPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLILHDEIECLEFERHGAGGSSISSHYFDLLVRLKNEQEHLFRN
IQRNEYHNLFEFINSKGLKITNLGETQATGGVAAVLQNSDDDAVDPHLERIKNSRDGGGD
EESDEEDEDFVADKDDGGSPTDDSGEEGSDASVSGDEEKPKKELKKDAVPKAASVKRKQK
DGDEDGSKKRKQPKKKKDPNAPKRAMSGFMFFSQSERENLKKNNPGMSFTDVGRALGDKW
KKMTSEEKEPFEAMARADSKRYKEAMAGYKSAPTNIDSGNESDSE
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcggatggtcacctcttcaacaatatccttcttgggggccgtggtggaactaatcca
gggcaactcagaattcactctggtggtattgtttggcgaaagcaaggcggtggaaaggtt
gttgaagtcggaaaatcagatttagtgggtgtaagctggatgaaggttcccaagagttat
cagcttggtgttaggattaaggctgggctagtctataaatttattggctttcgtgaacag
gatgtcaataacttgaatagttttatttcaaacactcttgggataacgccccaggagaaa
cagctgtctgtcagtggtcgcaactttggagagattgagttaaatgggaatatgctaaca
tttctggtgggttcaaagcaagcatttgaagtgtctttagcagatgtgtcgcaaacgcaa
ctacagggaaaaaatgatgtctcccttgagtttcatgtagatgatacgactggagcaaat
gagaaggattctttggtggagttggcctttcatatacctaacagcaatacgacttttgtt
ggggatgaaactcgccctcctgcacaggtcttccgcgataaaattatgtccatggcagat
gttggtccatctggtgaagaagctgttgtgacctttgatgggatcgctgtacttacacca
agagggcgctacactgttgagcttcatatttcattcttccgcctccttgggcaagccaat
gatttcaagattcagtatagcagtgttgttcgtctttttgtgctgccaaagttcaatcaa
cctcatactttcgtcatcattactcttgacccacctattagaaaaggacaaacattatac
ccacatattgttttacagtttgaaacagaatatgtggttgaaagcacgctgtctatttct
gaagatctcttgagcacaaagtacaaggaccgactggaagcatcatataagggattattg
tatgacgtcttcacggctattttgcgtggcttatccggtgcaaaattaacacgaccgggg
aaattccgtagctgtcaagatggatatgcagtgaaatcatcattgaaagctgaagacggt
atcttatatcctcttgaaaagagctttttcttcctgcctaagcctccaactctcatacta
catgatgagattgaatgccttgagtttgagaggcatggtgctggtgggtcaagtatctcg
tcccattattttgatcttctcgtgaggcttaaaaacgagcaagaacatctgtttcggaat
attcagagaaacgagtatcacaacctcttcgaattcatcaactcaaagggattgaagatc
acaaaccttggagaaacacaagctactgggggtgtcgctgctgttcttcaaaactctgat
gatgatgctgttgatccacaccttgagcgtattaaaaattcacgagatggaggtggtgat
gaagaaagcgatgaagaggatgaggactttgttgcagacaaggatgatgggggttctccc
actgatgactccggtgaagagggatcagatgccagtgtgagtggagatgaagagaagccc
aaaaaggaactgaagaaggatgccgttcctaaagctgctagtgttaagaggaaacaaaag
gatggcgacgaagatggttcaaagaagagaaagcagccaaagaagaaaaaggaccctaat
gcgcctaagagagctatgtctggctttatgttcttctctcaaagtgaaagagaaaatttg
aaaaagaacaacccaggcatgtctttcacagatgttgggagggcacttggggataagtgg
aaaaagatgaccagtgaagagaaagagccgtttgaggccatggcccgagctgattcgaaa
cgatacaaggaagcaatggctggttacaagagtgctccaacaaacatcgattctgggaat
gaatctgacagcgagtag

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