Amborella trichopoda: 18431954
Help
Entry
18431954 CDS
T02990
Name
(RefSeq) tRNase Z TRZ1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18431954
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
18431954
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
18431954
Prokaryotic type
18431954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
DUF4502
Motif
Other DBs
NCBI-GeneID:
18431954
NCBI-ProteinID:
XP_006842128
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MATVNLEKNPKNSELRGSMGEENPKIAECEAHVHEENPIIPETKVHVDGENLRISETKSD
ADGENPRNMENHGIEKEKSASVSSSCPENDAKNPKTKKQKLEILGYSIEGLSIGGQETCI
MFPNLKLAFDIGRCPQRAINQDFLFISHGHMDHIGGLPMYVATRGLYRMKPPTIFVPASI
KQHVEKLFEVHRAMDDSELKHNLIGLKVGEEFQFRRDLIVRAFKTYHVIPSQGYIIYSVK
QKLKKEYVGLSGNDIKRLKFSGVEITDTVLAPEVAFTGDTMADFIVDPDNVDALKAKILV
MESTFVDSMMTVEHAREYGHTHLFEIAKHADKFENRAILLIHFSARYRPEEIEAAVAMLP
RNLDGRVFALTDGF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtcaaccttgaaaaaaatcctaaaaattcagaactgagaggaagcatgggc
gaggaaaaccctaaaattgcagaatgcgaagctcatgtacatgaagagaaccctataatt
ccagagaccaaggttcacgtagatggagaaaaccttagaatttcagaaaccaagagcgac
gcagatggagaaaaccctagaaatatggagaaccacggcatcgagaaagagaagagcgct
agtgtttcgagttcatgccctgaaaacgacgcaaaaaaccctaaaacgaagaagcagaag
cttgaaatactggggtattcaatagaaggcttatcaattggagggcaagagacctgtata
atgtttccaaacctaaagctggcatttgatattggaaggtgccctcagagagcaattaat
caggatttcctcttcatttcccatggccatatggatcacataggtggacttcccatgtat
gttgctactcgaggcctgtatcgtatgaagcccccaaccatctttgtcccggcatccata
aaacaacatgttgagaagctgtttgaggttcatagagcgatggatgattcagaacttaaa
cacaaccttataggcctgaaagtgggggaagagtttcagtttagaagggaccttatagtt
agagctttcaagacctaccatgtcataccaagccagggttacattatttactctgtgaaa
caaaaactgaagaaggagtatgttggtctttctggaaatgacattaagaggttgaagttc
tcaggtgtggagatcacagatactgtgttggcccctgaggttgcttttacaggagatact
atggctgatttcattgttgatccagacaatgttgacgcgttaaaagcaaagattcttgtc
atggagagtacctttgttgacagcatgatgaccgtagagcatgcaagagagtatggtcac
acccatctctttgagatagcaaaacatgcagataagtttgagaaccgagcaatactgttg
atccatttttcggctcgttacagaccagaggaaatagaggcagcagtggctatgttgcct
cgaaacttagatggccgagttttcgctcttacagatggtttttga
DBGET
integrated database retrieval system
