Amborella trichopoda: 18431989
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Entry
18431989 CDS
T02990
Name
(RefSeq) small GTPase LIP1
KO
K07933
Rab-like protein 3
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
atr04031
]
18431989
GTP-binding proteins [BR:
atr04031
]
Small (monomeric) G-proteins
Unclassified
18431989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roc
Ras
Arf
Gtr1_RagA
MMR_HSR1
SRPRB
AAA_16
MCM
RsgA_GTPase
nSTAND1
GTP_EFTU
ATP-synt_ab
NACHT
Sigma54_activat
AAA
AAA_7
Septin
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18431989
NCBI-ProteinID:
XP_011622520
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MFWRERDREREREQNGTPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSIAHPQQTVGCTVG
VKHVAYGSFSSSSNSINGDGERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQR
RTKLSLSKWASEVAATGTFSAPLGSGGPGGLPVPYLVIGNKADVAAKEGTQGSSGNLVDA
ARQWVEKQGLLPPSEELPLTESFPGSGGLLAAAKEARFDKEALTKFFRLLIRRRYFPDDT
PPQHPWSLTPVQKPIHHSDDSITEDEPIRKHTSLGSEDYRYNALPPLPAQRNLTPPPTLY
PQQPMTNPDSYSIPRFSMAGLQDYSSSSKPKRTDINV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgttttggcgtgaaagggatagggaaagagagagagaacagaatggcactcctctttgt
ggccaggtccgagtcctcgttgtcggcgactcaggtgtggggaaaacatctcttgttcat
ctaattgttaatggttcttctattgctcatccgcagcaaacagttgggtgtacggtgggt
gtgaagcatgttgcatatggtagcttcagtagctcttccaatagcatcaatggtgatggt
gagagagacttctttgtggagctttgggatgtctctggacacgatcggtacaaggactgt
cgatctcttttctattcacaaatcaatggtgttatttttgtccatgatctatcccaaagg
aggaccaaattaagtttgagcaagtgggcttcagaggttgcagccacaggcacattctct
gcccctttgggttcaggtggccctggagggctgccagtcccttaccttgttataggcaac
aaagcagatgtagcagcaaaggagggtacacagggaagcagtggaaatttggtggatgcc
gctcgtcaatgggttgagaagcaaggcctgctcccgccaagtgaagagcttcctttgact
gagagctttccaggcagtggtggtctacttgctgctgcaaaagaagctagatttgacaaa
gaagccctgacaaagttctttcgtttgttgattaggagaagatactttcctgatgataca
ccgccgcaacatccatggtcattgacaccagtccaaaagccgatacaccattcagatgat
agtataactgaagatgagcccattcggaagcacacaagtttgggcagcgaggattacagg
tataatgcgctccctcctcttccagctcaacgaaatcttaccccacctccaacactctat
cctcaacaacccatgaccaatcctgattcttatagcattccgagattctccatggctgga
ttgcaggactattccagcagttctaaacctaaaagaacagacattaatgtttga
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