Amborella trichopoda: 18432006
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Entry
18432006 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18432006
KO
K13095
splicing factor 1
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18432006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18432006
Spliceosome [BR:
atr03041
]
Complex A
Other components
Complex A specific factors
18432006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_7
Motif
Other DBs
NCBI-GeneID:
18432006
NCBI-ProteinID:
XP_011622563
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
QPDLNLTPIREADTKTPCSNGETPTLTQSHAENLDLTYNHGEGPNFGDNLEEPKPHPIQN
CEKPDQDHGERNPDPPHSYAEPDPSLSENPKQTPNLSESPNDQPDPNHTENQPENPYQNP
KPSEKPLVSENGGLTTTRSGTDREFSGGEEETSSKRRRRSRWEQPESGESLPDSGGRRRK
TRWADEEPKPLIQLPDFMKELTGGMELDPEVQALNIRLLDITRLLQSGLPLDDRPEGARS
PSPEPVYDNMGIRINTREYRARERLNRERQEIISQLIKKNPAFKPPADYRPPKLQKKLYI
PMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENE
DLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLCG
EPGHRQYACPARTSTFKSDVLCKICGDGGHPTIDCPMKGSGKKMDDEYQNFLAELGGGSL
PETRQNQSQPLLILNGPSSNTSGNSTTNPPWSSTNPGLGSMAQTQANGMKTAVKEYDDTN
LYIGYLPPNLDDDGLIRLFSPFGEIVMAKVIKDRITGLSKGYGFVKYSDVTQAIQATASM
NGYRLEGRVIAVRVAGKPPTGPPVTTITTAPPNPDATSVAYTAQHFNPMGSTPQSYGGGA
PVPWGPSPPQSYNPYVSHAPGSGVYGSAPPPYGVQYQGMGSYQPGLLPSSSPLVQSAPSL
GMQAQGGVQGGGVVYGGSQGYATPLMGYASYYGMAPTPPAPNMSAPMVDGSKGIGGVPWA
SNASVPPQNVSSAETSYGGDAEYEKFMSEMK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
caaccagacctcaacctcacccccatccgtgaagccgacacgaaaaccccctgcagcaat
ggagaaacccctaccctgacccaaagccacgcagaaaaccttgatttgacctacaaccat
ggcgaaggccctaattttggagacaaccttgaagaaccaaaacctcatccgattcagaac
tgtgaaaaaccagatcaagatcatggagaacgaaaccctgatccaccccatagttatgca
gagccggatccaagtctctctgaaaaccctaagcagacacctaacctatctgaaagcccc
aatgaccaaccagatcccaaccacactgagaaccagcctgaaaacccttatcagaacccc
aaaccatctgagaaacccttagtatcggagaatggtggcttaaccaccacaaggagtggc
actgatcgtgaattttcaggtggagaagaggaaacgagcagcaagagaagacgtcgaagt
cgatgggaacagccagaatcgggtgaatccttgccagattctggtggtcgtcggcggaaa
accaggtgggcagatgaggaaccgaaaccattaattcagctgcctgatttcatgaaggaa
cttactggtggcatggagcttgaccctgaagttcaagctctaaatatcaggttgctcgat
ataaccaggcttttacagtctggtttaccattagatgacagacctgaaggtgctcgatcc
ccttctccggaaccagtctatgataacatggggattcggatcaataccagggagtatcga
gcacgagagcgattgaacagagagagacaggagataatttctcaacttatcaagaagaac
ccagctttcaaaccacctgctgattacaggccaccaaagcttcagaagaagctttacata
cccatgaaagagtatccaggctacaattttattgggttgattattggtccaagaggcaat
acacaaaagagaatggagaaagaaacaggagctaagatagtgattcgaggaaagggttcg
gttaaggaagggaggttacaacaaaagagggatttgaaaccagacccaagtgagaatgag
gacttacatgttttggttgaggctgagacgcaagaagctttggatgcagcagctggaatg
gtggagaagcttttacaacctgtagatgaagggcttaatgagcacaaaaggcagcaactt
cgagagcttgcagctcttaatggaaccattagagatgatgaattttgcaggctttgtggt
gaaccaggtcatagacagtatgcttgtccagctcgaacttctacatttaaaagcgatgtt
ttgtgtaagatttgtggagatggaggtcacccaactattgattgccccatgaaaggatca
ggaaagaagatggatgatgaatatcaaaatttcttggctgaattgggaggtggatcattg
ccagaaaccagacaaaaccagagccaacctctcttaatccttaatggcccctcttcaaac
acatcaggtaacagcaccacgaatcccccctggtctagcactaacccaggtttaggtagc
atggctcaaacacaagcaaatggaatgaaaactgcggttaaggagtacgatgacaccaat
ctatacattggatatttgcctccgaatttagatgatgatggtttgattaggcttttctcc
ccttttggcgagatagttatggctaaggttatcaaagataggatcactggattgagcaaa
ggctatggttttgtgaaatactcagatgtgacgcaagccatccaggctactgctagcatg
aatggatatcgtttggaagggcgggtaattgcagtgagagtggcaggcaagccgcctacg
ggccctcctgtgaccaccatcaccaccgctccacctaatcctgatgcgacaagtgttgca
tatacggcacagcattttaacccgatggggtccacaccccaatcctatggtggaggtgca
ccggtcccttggggcccatccccacctcaatcctataatccttatgtctctcatgcgcct
gggtcaggtgtgtatggttcggctcctccaccctatggtgtgcaataccaagggatgggt
tcgtatcaaccgggcttgttgccctcttcttctcctttggttcaaagtgctccttctctt
ggaatgcaagcacaaggtggagtgcaagggggtggggttgtctatggtgggtctcaaggg
tacgctacccctttgatgggttatgcatcttactatgggatggcgccgacaccgccagcg
cctaatatgagtgctcctatggtggatggatcaaagggaattggtggtgtaccgtgggcc
tccaatgcttctgtgcctcctcagaatgtttcatcggcggagactagttatggtggggat
gcagagtatgagaagtttatgtcggaaatgaagtga
DBGET
integrated database retrieval system
