Amborella trichopoda: 18432072
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Entry
18432072 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18432072
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18432072
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18432072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
18432072
NCBI-ProteinID:
XP_011622545
LinkDB
All DBs
Position
Unknown
AA seq
2542 aa
AA seq
DB search
MEKEVQLLSRVSVNYLFLAQFETFRASLLSLRNRDSDLAVAILRAVVAEGGRFKGVLWSK
SVNSPPHFAWLSALELIEYGSYLSSKSKVDPELLKLKAEFLLILQMISSEVSESYGKFID
LDSIGGQDISIYESYESRPEDLAEFQGSESNLSEPTGFMVDVAALLDKLFNLGFQRLKRE
VVFENGLKDLNFSFTDGELKCLRRVICDQADLLDSLCLNIWKQMHYLDGYESKLALSLHR
GELSERTDNVVGDDNDFDGLDQFLLGSMIQREFQSVHLELLKKEVKDSDIDENFILSRLR
FLHLEYGLSVSEYRMVLQDCIEKFASFENGYGETWFSVREKMLKIYGETLSSNCLQLVQM
IQAIQDDLLSKEIELYRLSNADLAPPPLQKLQKYFDALSCTEDSVQSMVIRSCKQDMYHY
ARVTGVHVLETIMDAALSSLKREELRYAANVLVLFPLLQPLVAVMGWDLLPGKTAARRKL
MVLLWTSKSQMLRLGESSLYRKQSEEISCVEHLCNILCYRLDLAFFAECVNSGRPWNSKT
SLRLSGKELMGDGAEDMHMDPFVANFVLERLAVQTPLRVLFDTVPTIKFQDAIELISMQP
IASTSAAWKRIQDLELVHMRFALQSAVLALGALERCMIDKDEKYDNLAIWYLKDLQDHLE
AINNIPRKICMVSVIISLLHMDDLSANLTQYISLVGRSELPRTPTWEQPVFDGETRTVVS
FIGLILDILRHNLPSNGLEIDPNSWSNATIASGKQAMEWRISSAVQFIEDWEWRLSILQR
LLPLSERHWSWKEALAILRAAPSKLLNVCMQRAKYDIGEEAVHRFSLPPEDKAALELVEW
VDGAFRKASVEDVVSRVAEGIPGGDHELDFSSFCSQLGPLATVLLCIDVAATTAKSVHMC
SQLLHQAQTLLSQIFPGGAPKKGSTYWDQVQEACIITVTRRVLKRLHDFLDQSKFPSLQA
ILRGDMVVSPSSESNRQGQRQRALAILHQMIEDAHKGKRQFLSGKLHNLVKAVADEEMDE
SSSKESSYVESTVSLGSEKDGILGLGLRTVKSNSHSTAAVESSTDPTDYDLKDVNKRLYG
PLSSKPATYLSAFILYIATIGDIVDGVDTTHDFNFFSLIYEWPKDLLTRLVFERGSADAA
GKVADIMGADLVHEVISACVPPVFPPRSGHGWACIPVLPAYPMMSLENKIHSHSSVEAQP
SSSSSLIPGVPLYPLQLNIVKHLATLSPVRAVLACVFGSTILSSGSESLGSSSSHGSITQ
PSDADRLFYEFALDQSYRYPTLNRWIQMQSNLHRVTESAIITKRMAETGKSTAGSKTLVK
RLREPDSDTESEVEDDGYGAVGAHASVSVSEFDKKEFAASGTKQDLQRSESFDSDRTVFL
SFDWENEGPYEEAVERLINDGKLMDALALSDRCLRNGASDRLLQLLVERGEENMSASGLP
VYGGHNFGSNSWQYCLRLKDKRLAATLALKYVHRWELDAALDVLTMCSCHLTADDPLKTE
VMQMRQALQRYNHIWCSDDQYSSWQEVEADCKEDPEGLALRLAGKGAVSAALEVAESASL
SIDLRRELQGRQLVKLLTADPVNGGGPAEASRFLSSLRDSDDALPVAMGAMQQLPSLRSK
QLLVHFFLKRRAGNLSDVEISRLNSWALGLRVLAVLPLPWQQRCSSLHEHPHLILEVLLM
RKQLQSASLILKEFPSLCDNDLILKYSAKAIAVNVTPPLGEQRYRIAASKTKQRGRSGVP
PKSNIGNSLSNLQREARRAFSWAPRDTGNKVAPKETQKKRKSSGFSPSERATWEAMAGIQ
EDRVSFHSGDSQERLPSIATAEGWILTGDPSKDDAVRMSHQYESAPDIILFEALLSLCSD
ELVSAKGALELCITQMRNVLSSQQLPLHSSMEKVGRAYHATETFVQALVHARSHLRKLVG
SSDLSSTSDRSREADDVSSDAGSSSISSQCTDELSELVSQADIWLGRAELLQSLLGSGIV
ASLDDIADKESSAHLRDRLIGDERYSMAVYTCKKCKIDTFPVWSAWGHALNRMEHYAQAR
VKFKQALQLHKGDPAPVIIEIINTMESGPPVDVSSVRSMYEHLAKSAPTILDDSLSADSY
LNVLYMPSTFPRSERSRRSQEATNSHAVLSNSVNFEDGPRSNLDNDNIRYVECINYLQEY
ARQEMLSFMFRHGHYVDACLLFFPPNAIPVPAQPSAHGTATQSSSPQRPDPLGTDYGTIE
DLCDLCVGYGAMFVLENVIGTRNASAASHEAVVSHYTAAALTRICNYCETHRHFNFLYKF
QVLKKDHVAAGLCCVQLFMNSASQEEALRHLEHAKMHFVEGLSARHKAGESTKLISKGVR
GKSASEKLTEEGLVKFSARVAIQMDVVRSFNESDGPPWKHSLFGNPNDPETFRRRCEVAE
TLAERNFDLACQVIYEFNLPAVHIYAGVAASLAERKKGNQLTEFFRYIKGTIEDDDWDQV
LGAAINVYANRHRERPDRLIDMLSSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAH
QALQTNALPVLDMCKQWLAQYM
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaggtccagctcttgtcacgagtatctgtaaactacctcttcttggcccaa
ttcgagacatttagggcttcattgctaagcctcaggaacagggattcagaccttgctgta
gcgattctcagagctgtagttgcagaaggtggaaggttcaagggtgttctatggtcgaaa
agtgtcaactcacctcctcatttcgcctggctatcagctctcgagctgatcgaatatggc
tcctatttatcttcaaaatcaaaggtcgatcctgaattgttgaagttgaaggcagagttt
ttactcattttacagatgatcagctctgaggtctctgagagttatgggaagttcatagac
ttggacagcataggtggccaggatatttctatctatgaaagctatgagtcaaggcccgag
gatcttgctgagtttcaaggaagtgaatcgaatttgagtgaacctaccggattcatggtt
gatgtggctgcccttttagataagctcttcaatctagggtttcagaggttaaagagagag
gtagtttttgaaaatgggctcaaggatttaaacttttcatttacagatggggaattgaag
tgtttgaggagagttatttgtgatcaagcagatcttctagattccttgtgtctcaatatt
tggaaacagatgcattatttggacggttatgagtctaaattggcattgagtttacataga
ggagaattatcagagagaactgataacgttgttggtgacgataatgattttgatggtttg
gatcagtttttgttggggtctatgattcagagagaatttcagagtgtgcatttggagttg
ttgaagaaagaggtgaaggatagtgacattgacgaaaatttcattctttctcgcctccga
tttttgcatttggagtacgggttatcagtgtcagaatacagaatggttttgcaagattgc
atcgaaaagtttgcatcctttgaaaatggctatggagaaacttggttctcagtgcgcgaa
aaaatgctgaagatctatggagaaacattatcatctaattgtttgcagcttgtacaaatg
attcaggccattcaagatgatttgctttctaaagaaattgagctgtacagactttcaaat
gctgacttggcccctccaccacttcaaaagcttcaaaagtactttgatgctttaagttgc
actgaagactctgtccagagtatggtaattagatcctgcaagcaagatatgtaccactat
gcccgcgtaactggagttcatgttcttgaaaccataatggatgctgctctatcatctttg
aagagggaagaactgcgatatgctgccaatgttcttgtgctctttcccctacttcaacct
ctggtagctgtcatgggttgggatctcttacctggtaagacagctgctcgaagaaaatta
atggtgctattgtggacaagcaaatctcagatgctgaggttgggagagtcttcattgtat
agaaagcaatcagaagagatatcttgtgtggagcatctatgcaacattttatgctatcgc
ctggaccttgctttttttgcggagtgtgtcaattcgggccgaccatggaattcaaaaaca
tctttacggttatctggaaaagaactgatgggtgatggagctgaagatatgcatatggat
ccttttgttgcaaattttgtgctagaacgacttgctgtgcagacacccttaagagttttg
tttgatacagtaccaaccataaagtttcaagatgcaattgaacttatcagcatgcaaccc
attgcatctacgagtgcagcctggaaaaggatacaggaccttgagcttgtacacatgcga
tttgctttacaatctgctgttcttgctttgggagctctggaaagatgtatgattgacaag
gatgaaaagtacgacaatctcgctatttggtatttaaaggatttgcaagatcatttagag
gctatcaacaatataccccgtaagatatgtatggtgagcgtcatcatctccctgctgcat
atggatgacctctcggctaacctaacacagtacatttctttagttggccgttccgaactg
cctcgtactcctacttgggaacagcctgtttttgatggggaaactagaacagtggtgtca
tttattggattaatacttgatatcttgcgccataatttaccgtcaaatggacttgaaata
gatcctaattcatggagcaatgccacaatagcatctggaaagcaggcgatggagtggaga
atttcatctgcggtacagttcattgaagattgggagtggcgcttgtccattttgcagcgt
cttctacccttatccgaacgccattggagctggaaagaagcattggcaattcttcgtgct
gctccttctaagttgcttaatgtctgcatgcaaagagcaaaatatgacattggcgaagaa
gcggtacataggttctccttacctccagaagataaagctgctctggaacttgttgaatgg
gttgatggtgcctttagaaaggcatcggttgaagatgtggtttctcgtgttgctgaggga
attccaggtggcgatcatgaactggacttttcgtccttttgttcccagttgggtccttta
gctacagttcttctttgtattgatgtagctgcaactacagctaagtcggttcatatgtgt
agtcaactactacaccaggcacagaccttgctgtcacagatatttccaggtggtgctcca
aagaaaggctcgacatactgggatcaggtccaagaagcatgtattattactgtgacaagg
cgtgtccttaagcgtcttcatgatttcttagatcagagtaaatttccgtcccttcaagca
attctcagaggtgatatggttgtatctccttcaagtgagagtaacaggcaaggacaaagg
cagcgagctcttgccattttgcatcagatgattgaggatgctcacaagggaaagcggcag
tttttgagtgggaagctgcacaatcttgtaaaagctgtcgctgatgaagaaatggatgaa
agctcatctaaagagagctcctatgtggaatctacagtaagcttgggttctgagaaggat
ggaattcttggccttggtcttaggactgtgaaatctaactctcacagcacagcagctgtg
gaaagtagtactgatccaactgattatgatttgaaagatgtgaataaaagattatatggt
cccctaagttcgaaaccggccacatatctttctgcatttatcctctacattgcaacgatt
ggtgatatagtcgatggagtcgatactactcatgatttcaactttttctctctcatatat
gagtggcctaaagatcttttaactcgtctggtttttgagcgaggcagtgctgatgcagct
ggaaaggtagctgatattatgggtgcggaccttgttcatgaagttatatcagcttgtgtt
cctccagtcttccctccgaggtctggtcatggctgggcctgcattcctgttctaccagcc
tatccgatgatgagtcttgagaacaaaattcattctcactcttctgtagaggctcagcct
agttcttcctcatcattaatacctggagtcccactctatcctcttcagcttaatatagtg
aagcacttggcaacactgtcacctgttcgagctgtattggcttgtgtctttgggagtacc
atattatccagtggctctgaatcattgggatccagtagctcgcatggttcaataacacaa
ccatctgatgctgacaggttgttttatgagttcgcacttgatcagtcttacagatatcca
actttgaatcgatggatacaaatgcagtccaaccttcatagagtaaccgaatctgctatt
ataaccaaacgtatggctgaaactggcaaatctacagctgggtccaaaactttggtgaaa
cgattacgggaacctgacagtgatacggaatcagaagtggaagatgatggttatggagca
gtaggcgctcatgcttctgtatctgtctcagagtttgataaaaaggagtttgcagcttct
ggtactaagcaagacctgcagagatcagagagttttgattctgataggacagtttttctt
tcttttgattgggagaatgaagggccatatgaagaagctgtagagagactaattaatgat
gggaaattgatggatgcgctggctctttctgatcgttgtttgcgaaatggagcctctgat
cgattactgcagcttcttgttgaacgtggagaggaaaatatgtcagcttcaggacttccg
gtctatggaggacataacttcggtagcaatagttggcagtattgtttgcggctaaaagat
aaacgactagctgctacacttgcactcaagtacgtgcacaggtgggaactagatgcagcc
ttggatgtcctcacgatgtgcagttgtcatttgactgcggatgatccacttaaaactgag
gtcatgcaaatgcgacaagctttgcagagatacaatcacatttggtgttcagatgatcaa
tacagcagctggcaagaggtcgaagctgattgcaaggaggatcccgaaggtttggcactt
agacttgctggaaagggagctgtatctgcggcccttgaagttgcagaaagtgcttcttta
tccatagatttgcgaagagaactacagggccgacaacttgtcaagcttcttactgctgat
cctgtaaatgggggaggcccagctgaggcttcaagatttctttcatctttacgtgattct
gatgatgctcttccagttgctatgggtgccatgcagcagttaccaagtctgcgttcaaag
cagcttcttgttcactttttcttgaagcgacgggctgggaatttgtcagacgtcgagatc
tcacgtcttaattcttgggctttgggtcttcgcgtgctagcagttttgcctttgccatgg
cagcaacggtgttcatcacttcatgaacaccctcatttaatactggaagttctcttgatg
aggaaacaacttcagtctgcttcattgatcttgaaggagttcccttctttgtgtgacaat
gatctgattcttaaatattcagcaaaagcaatagctgtcaatgtgactcccccattaggt
gagcaaagataccgcattgcggcctcaaaaacaaaacaaagaggtcgaagtggcgtacca
cctaagtcaaatattggtaatagccttagcaacctacagagagaggcccgtagggctttc
tcttgggctcctcgagatactggtaacaaagttgcacctaaggaaacccaaaagaaaagg
aaaagctcagggttttctccatcagagagagctacttgggaagcaatggctggtatccaa
gaggaccgtgtatcctttcattctggtgatagtcaggaacgacttccttctattgctaca
gctgagggttggatactcactggagatccaagtaaggacgatgctgttcgcatgtctcac
caatatgaaagcgctcctgatatcatacttttcgaagcactgctctctctatgctcagat
gaattggtttcagctaaaggcgctctagagttgtgcattacccagatgaggaatgtgttg
agctcccagcaactccccttgcattcatccatggaaaaagttggacgagcttatcatgca
actgaaacttttgttcaggcactagttcatgctaggtctcatctgagaaaacttgttggg
agtagtgatttgtctagcacttcagatcgaagtagagaagctgatgatgtatcctctgat
gctggcagttctagcatcagtagtcagtgcacagatgagctgtcagaacttgtatcacag
gctgatatctggcttgggcgtgccgagttacttcaaagtcttttggggtcagggattgtc
gcttcacttgatgatattgctgacaaggaatcatcagctcatcttcgtgacaggttaatt
ggagatgaacgatatagcatggctgtatatacatgcaaaaagtgcaagattgatactttt
cctgtctggagtgcttggggccatgctctgaatcgaatggaacattatgcccaagcccgt
gtgaagttcaagcaagctcttcaattgcacaagggtgatcctgctcctgttattattgag
atcatcaatacaatggagtctggccctccagtagatgtctcatctgtccgttcaatgtat
gagcatttggcaaaaagtgccccaacaatcttggatgattctctttctgcggattcatat
ctcaatgttctatacatgccatctactttccctcggtctgagaggtcaagacgatctcag
gaagctacaaatagtcatgctgtgctgtcaaattcggtgaactttgaggatggtcctcgc
agcaacttggacaacgacaacatcagatacgtggagtgcatcaactatttgcaagaatat
gcacggcaggaaatgctcagtttcatgttcagacatggtcactatgttgatgcttgtttg
ctcttctttcctccaaatgctatccccgtacctgctcaaccatcggcacatgggacagcg
actcaatcttcatcacctcaaaggccagaccctttaggaactgattatggaaccattgag
gatctatgtgacttatgtgttggatatggtgccatgtttgtgctagagaatgtcattgga
acaagaaatgcatctgctgcatcgcatgaagctgtggttagccactacacagctgctgct
cttacccgcatatgcaattattgtgaaactcatcgccatttcaattttctctataagttt
caggttctcaagaaggatcatgtagctgctggactttgttgtgttcagttgtttatgaac
tctgcttctcaggaggaagctctaagacatctagagcatgcgaagatgcactttgtagaa
ggtctatctgcacgacacaaagcaggagagtccacaaagctcatttccaagggtgttcgt
ggaaagagtgcctccgagaagcttactgaagaagggcttgttaaattctctgcacgtgtc
gctatacaaatggatgtagtgaggtccttcaatgagtctgatggaccaccatggaagcac
tctcttttcggaaatcctaacgatcctgaaactttcaggagaagatgtgaggttgcagag
acacttgctgaaaggaattttgacctggcttgccaagtaatctatgaattcaatcttcct
gctgtccatatatatgccggcgtagcagcatcattagcagaaaggaaaaagggtaatcag
ctgactgaattttttaggtatatcaaaggcaccattgaagatgatgactgggaccaggtg
ttgggtgcggccatcaatgtatatgccaacaggcatagggagcgaccggatcgactcatt
gacatgttatcgagcagccacaggaaggttttggcttgtgttgtttgcggtcgcttgaag
agtgcctttcagattgcttctcgaagtggcagtgtggctgatgttcaatatgtggctcat
caggcattacagacgaatgcacttcctgtacttgatatgtgtaagcaatggttggctcag
tatatgtga
DBGET
integrated database retrieval system
