Amborella trichopoda: 18432164
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Entry
18432164 CDS
T02990
Name
(RefSeq) chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic isoform X1
KO
K27711
chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18432164
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18432164
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pept_tRNA_hydro
DUF7539
DUF1057
Motif
Other DBs
NCBI-GeneID:
18432164
NCBI-ProteinID:
XP_011622594
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MMAQTISFPGTCISYRNFTRRCLRSNTHLSASLTHAEGVKLEYSPWLLVGLGNPGNKYHG
IRHNVGFEMIDCIAQEEGIALNTIQSKTLLGIGSIGVVPVLLAKPQTYMNFSGESVGAVA
AYYQVHLRHILLIYDEMSLPNGVLRLQAKGGHGYHNGMKSVMDHLDNSCEFPRLSVGIGN
PPGTMDMKAYLLQKFSAKEREQINAALWQGVEAVRTLVLEGFDDNVNRFNLRQKYKYHQV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccaaaccatttcttttccagggacatgcatttcttatcgaaactttactcga
aggtgcttgagatccaatacacatttatctgcttccttaactcatgctgaaggagttaaa
ttggaatattctccatggttacttgttggattaggaaacccagggaacaagtatcatggt
atcaggcacaatgttggctttgaaatgattgattgtattgctcaagaagaaggcattgcc
ttgaatacaatacagtcaaagaccttactaggaataggttcaattggagtggtacctgtg
ttgttggcaaagcctcaaacctatatgaatttcagtggagaatcggtaggagcagttgct
gcttactatcaagtacatctgcgacatatcttgttgatttatgacgagatgagtttacca
aatggtgttttgaggcttcaagctaaaggagggcatgggtatcataatgggatgaagagt
gttatggatcatcttgataattcctgcgaatttcctcgactgagcgtaggcattgggaat
cctccaggaaccatggacatgaaagcttatttgctgcaaaagttcagtgcaaaggagcgt
gaacaaataaatgctgctctatggcaaggtgtggaagcagtgagaactttagttttagaa
ggcttcgatgacaacgtcaatcgatttaaccttcgccagaagtacaagtatcaccaggtg
tga
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