Amborella trichopoda: 18432207
Help
Entry
18432207 CDS
T02990
Name
(RefSeq) 3-ketoacyl-CoA synthase 5 isoform X1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
atr
Amborella trichopoda
Pathway
atr00062
Fatty acid elongation
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
18432207
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
18432207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Motif
Other DBs
NCBI-GeneID:
18432207
NCBI-ProteinID:
XP_006842379
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MRASQIMPNFQSSVWLKYVKHSFQYLVNHFLTFLLVPIMAASAVELLRMGPKEILRLCDS
PHLGLVHILCSSLFIVFMATLYFISKPYPIYLVDYTCYKPPGTYRVPRSFFLEHLKLSPS
FDPESVKFQFRILERSGLGERTCVPPALHYIAPDPTMADARAEAELVIFSAMDALFERTG
IKPQDVDFLIVNCSMFSPTPSLSDMVINKYKMRSNIKSFNLSGMGCSPSPISVNIARDLL
QVHANAYAVVVSTEIVTPNWYTGNQRSMLLPNCLFRMGAATLLLSNRRRESRRAKYRLMH
VVRTHRGADDRAYHCVFQEEDVQRNVGISLSKDLMGIAGEALKSNITTMGPLVLPASEQL
LFLLSLFARKIFNLKLKPYIPDFKQAFEHFCIHAGGRAVIDELEKNLQLSPEHVEASRMT
LHRFGNTSSSSLWYEMNYIEAKGRMKKGDRSWQIGFGSGFKCNSLVWKCNRSIKAEADGP
WADCIDQYPVHTVEAVKLQQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcctctcaaatcatgcctaatttccagagctcagtttggctcaaatatgtcaaa
catagttttcagtaccttgtaaaccactttctcacttttctcttagtccctataatggca
gcatcggctgttgagcttttacgcatgggtccgaaagagatccttcgtctgtgcgactct
ccccacttaggcctcgtccatatactctgttcgtctctcttcattgttttcatggccact
ctctactttatctccaagccataccccatttacttggttgattacacatgttataagcca
ccaggcacttacagagtaccacgctctttcttcctagagcatcttaaactctcgccctcc
tttgatccagaaagtgtaaaatttcagtttcgaattctggagcgctccggtttgggggaa
aggacctgcgtgccccccgctctccactacatagcgccagacccaaccatggctgatgct
cgagctgaggctgagcttgttatcttctctgccatggacgcattatttgaacgtacgggg
atcaagcctcaagacgttgatttcttgatagtgaattgcagtatgttttcccctactcct
tcgctatcagatatggtgatcaacaagtataagatgaggagcaacatcaagagcttcaac
ctatctggaatgggatgcagtcccagccccatctctgtcaatatagctcgtgatttattg
caggtgcatgcaaatgcgtacgcagtggtggtgagcacggagatcgtcacccccaactgg
tacaccggcaaccagcggtccatgctcctcccaaactgtctcttccggatgggagctgcc
accctcctgctctcgaaccgccgcagagaaagccgccgcgcaaagtaccgtttgatgcat
gttgtgcgcacccaccgtggcgctgatgatcgtgcctaccactgtgtcttccaggaggag
gatgtccaacgaaatgtcggcatatcgctctccaaagatctcatgggaattgcaggtgag
gccctcaaatcgaatatcacgactatgggacccctcgttttgccggcttctgaacaactc
ctcttccttctctctctatttgctcgaaagatatttaacctgaagttgaagccttatatt
cctgattttaaacaagcttttgagcatttctgcatacacgcgggagggagagcggtgatc
gatgaactggaaaagaatttgcagttgtctccggagcacgttgaggcatcgaggatgaca
cttcataggtttgggaacacatcatcgagtagtttgtggtatgagatgaattacattgag
gctaaagggaggatgaaaaaaggtgataggagttggcaaattgggttcgggagtgggttc
aaatgcaatagtctggtttggaagtgcaaccgaagcatcaaagcagaggctgacgggcca
tgggcggattgcatcgaccaataccccgtgcataccgtggaggctgtcaagctccaacag
tga
DBGET
integrated database retrieval system
