Amborella trichopoda: 18432220
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Entry
18432220 CDS
T02990
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
atr
Amborella trichopoda
Pathway
atr00450
Selenocompound metabolism
atr00970
Aminoacyl-tRNA biosynthesis
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
18432220
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18432220
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18432220
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18432220
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
18432220
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
18432220
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18432220
Prokaryotic type
Other AARSs
18432220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
18432220
NCBI-ProteinID:
XP_006842391
UniProt:
W1P8Y8
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MGDATGNGGPKLPIPGMRNIMITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRGYNTI
YMCGTDEYGTATETKALEENCTPQEICDKYYAIHNEIYEWFDISFDKFGRTSCPDNTEIS
HAIFHKLLENNWLSENTMQQLYCDTCQRFLADRLVEGACPTPGCGYEDARGDQCEKCGKL
LNPNELIDPRCKVCRSSPRSRDTNHLFLELPLLKDKLEEYVKTTSVAGSWSQNAIQTTNS
WLKEGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYVAITSSYTSEWAKWWKDPE
NVELFQFMGKDNVPFHTVMFPSMLFGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFG
NDAKDTKIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKLNNELLKNLGNFIHRVLSFIAKP
EGEGYGSVIPDAPNADSHLLTKKLAETVGNLVEQFVEAMEKVKLKQGLKIAMSVSSEGNA
YLQDNQFWKLHKTDPTSCATVMKTSVGLVHLLASLLEPFMPSFSRKVVAQLNLPCESLSI
CKQKGDAARERRPWDIVPAGHKIGKPEPLFFEMKDDEVNDYRERFAGSQSDRAVKAEAEA
QKIAEHLKKTTVSDGTTKKKGQSKLPAAEKEKLKEVEISVARLDIRVGLVTKVQKHPDAD
SLYVEEIDVGEESPRTVVSGLVKYIPLEKMQNRKVCVLCNLKPATMRGIKSQAMVLAAST
EDHTIVELVDPPENARVGERVTFPGFSGEPDEVLNPKKKVWETVQVDLRTTEDLVASYKG
VPFTTSGGVCKVSSIACGSIR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgctactggtaatggtggacctaagcttccgattcctggcatgagaaatatt
atgattacaagcgcccttccatatgttaacaacgttccccatctcggcaacataattggc
tgtgtattgagcgctgatgtttttgctcggtattcccgtcttcgtgggtacaacacgata
tacatgtgtggaactgatgagtacggaacagctactgagaccaaggcccttgaagagaat
tgcactcctcaggagatttgtgacaagtattatgcaatccacaatgagatctatgaatgg
tttgatataagctttgacaagtttggacgtacatcttgtcctgataacactgaaattagc
catgcgatattccacaaactgttggagaataattggctttccgaaaacacaatgcaacag
ctctattgtgatacatgccagcgatttctggctgacagacttgtggaaggagcatgccct
actcctggatgtggttatgaagatgctcgtggtgatcagtgtgaaaaatgtgggaagttg
ttaaatccgaacgaactgatagatcccagatgcaaggtctgccgcagctcccctcgcagt
cgcgatactaaccatttatttctagaacttccattactgaaagataagttagaagagtat
gtcaagactacatcagtggctggatcttggagccaaaacgcaatccagactacgaattct
tggctaaaggaaggattgaagccccgttgcatcacgagagatctgaaatggggtgttcct
gtccctcatgaaaaattcaaagacaaggttttctatgtgtggtttgatgcaccaatcgga
tatgtggcaataacttcaagctatacatcagagtgggctaaatggtggaaggatcctgaa
aatgttgagttgtttcagtttatgggcaaggataatgttccatttcatacggttatgttt
ccttcaatgctttttggaactggcgagaactggacactgatgaagacaattagtgttaca
gaatatttaaactatgaagcgggaaaattctccaaaagcaagggtgtgggagtttttggt
aatgatgccaaagatacaaaaatacctgttgaagtttggagatattatctgctcacaaac
aggcctgaggtgtcagacactttatttacgtggacagacttgcaagccaaactgaacaac
gaattgttgaaaaaccttggaaattttattcatcgcgtcctcagctttattgccaaacct
gaaggagaaggctatggttctgtcattcctgatgcaccaaatgcagattcacatctactt
actaaaaagttagctgagactgtgggtaaccttgttgagcagtttgtcgaagcaatggag
aaggtcaagctcaaacaaggtttgaaaattgcaatgagcgtctctagtgaggggaatgca
tatctacaagacaaccaattctggaagctccacaaaacagaccctacttcttgtgccact
gtaatgaagacttctgttgggcttgtgcatcttcttgcttctcttcttgaacctttcatg
ccttctttctctcgtaaggttgttgcacagcttaatttgccttgtgaaagcctttccatt
tgcaaacaaaaaggagatgctgcaagggaaaggagaccttgggatatagtacctgcaggg
cataaaatagggaagccagagcctctattctttgagatgaaagatgatgaagtaaacgac
tacagagagaggtttgctggaagccagtctgatagggctgtaaaggcagaagctgaagca
cagaagatcgctgagcatcttaagaaaactacagtttcagatggaaccactaagaaaaag
ggccaatccaagttgcctgcagcagaaaaagagaaactgaaggaggtagagatttcagtt
gcaagacttgatatccgtgtgggtctcgtaaccaaagtccagaagcatccagatgctgat
tccttatatgtggaagagatcgatgtgggtgaagaatctcctcgaactgttgtcagtggc
cttgtcaagtacattcctcttgagaagatgcagaatcggaaagtttgtgtcctttgtaac
ctgaaaccagcaaccatgcgggggataaaatcacaagcaatggttcttgctgcctccact
gaagatcacactattgtcgagttggttgatccaccagagaacgcacgagttggagagagg
gttacattcccagggttttcaggtgagcctgatgaagtgctgaatccaaagaagaaggtc
tgggaaaccgttcaagttgacttacggacaactgaagatcttgtggcttcgtacaaaggt
gttcctttcacaacatcaggtggtgtatgcaaagtttcttcaattgcttgtggatcaatt
aggtag
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