Amborella trichopoda: 18432348
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Entry
18432348 CDS
T02990
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18432348
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18432348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
18432348
NCBI-ProteinID:
XP_006842520
UniProt:
W1PB17
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MAGKSMETELLKLFDKAKKAADLAAFDQGSVQTEEARCLDTLKLMKDFPVSTSILVSTQV
GKRLRPLTKHPRAKIQAVASDVLDIWKNLVIKETSKNNKTNNKSDEKNSIRVEVKSINSG
SKGENVKIEMSPNASVNVEKVPKVESIKVEKVEKTTSVRVEKIAKEEREPKKASSSFAPP
KLSGMIKCNDSLRDKYRELLAEAFSKVSSETDEAMMEEVNACDPIRVAVTVESVMFEKMG
RSNGAQKYKYRSILFNLKDANNPDLRRRVLLGKIKPENLINMTPEEMASDQRKRENNQIK
EKALFECQREGAPKATTDQFRCGRCGQRKTTYHQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaatcaatggaaactgagcttctgaaactgtttgacaaggcaaagaaagct
gcagatttagctgcatttgatcagggctcagtccagactgaggaagcacggtgcttggac
actctcaaactgatgaaggactttcctgtctctacttcgatccttgtttcgactcaggtt
ggaaaacgtctccgtccccttaccaaacatcccagggccaagattcaagcagttgcttct
gacgtgcttgatatctggaaaaatcttgttattaaggagacctcaaagaataataagaca
aataacaagtcagatgagaagaactctatcagagtcgaagttaagtctattaactcaggc
tcaaagggagagaatgttaagatcgaaatgagccctaacgcaagtgtaaatgttgagaag
gtcccaaaggtcgaatctatcaaagttgagaaggttgaaaaaactacaagtgttcgggtt
gagaaaatcgctaaggaggagagggaacccaagaaagcttcgtcttcttttgcacctcca
aagctctcaggaatgatcaaatgcaatgattcattgagagacaagtaccgtgaactcttg
gctgaagccttctccaaagtatccagtgaaactgatgaagctatgatggaggaagtgaat
gcttgcgatcccattagagttgctgttacagttgaatccgttatgtttgagaagatgggc
cgttccaatggtgctcaaaaatacaagtacaggtccattttgtttaatctaaaagatgca
aataatccagatttgagaagaagggttcttcttggtaagattaagcctgagaatctaatc
aatatgactcctgaagaaatggctagcgatcagagaaagcgtgaaaacaatcaaataaaa
gagaaggcactatttgagtgtcaaagagaaggagcaccaaaagccacaactgatcagttc
aggtgtggaaggtgtgggcaaaggaagacaacttatcatcaattgcaaactcggagtgct
gatgagcccatgaccacattcgtgacctgtgtaaactgcaacaaccactggaagttctgt
taa
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