Amborella trichopoda: 18432542 Help Entry 18432542          CDS       T02990                                  Name (RefSeq) chaperonin CPN60, mitochondrial   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism atr  Amborella trichopoda Pathway atr03018   RNA degradation Brite KEGG Orthology (KO) [BR:atr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     18432542  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:atr03019]     18432542    03110 Chaperones and folding catalysts [BR:atr03110]     18432542    03029 Mitochondrial biogenesis [BR:atr03029]     18432542   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:atr04147]     18432542 Enzymes [BR:atr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      18432542 Messenger RNA biogenesis [BR:atr03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      18432542 Chaperones and folding catalysts [BR:atr03110]  Heat shock proteins   HSP60 / Chaperonin    18432542 Mitochondrial biogenesis [BR:atr03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     18432542 Exosome [BR:atr04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    18432542   Exosomal proteins of other body fluids (saliva and urine)    18432542   Exosomal proteins of breast cancer cells    18432542   Exosomal proteins of colorectal cancer cells    18432542   Exosomal proteins of bladder cancer cells    18432542 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-GeneID:  18432542 NCBI-ProteinID:  XP_011622760 LinkDB All DBs Position Unknown AA seq 575 aa AA seqDB search MYRLASGLLAKSRIRNTSSQIGSRVNWNRNYAAKDIRFGIDARALMLKGVEDLADAVRIT MGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNMGASLVKQVANATNDVAGDGTT CATILTRAIFSEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSRARMISTSEEIAQVGTI SANGEREIGELIAKAMEKVGKEGVITIEDGKTLFNELEVVEGMKLDRGYISPYFITNQKT QKCELEDPLILIHEKKISSINAVVKVLELALKKQRPLLIVAEDVESDALATLILNKLRAG VKVCAIKAPGFGENRKAYLQDLATLTGGEVITEELGLNLEKVDLKMLGSAKKVTVSKDDT VVLDGAGDKKAIEERCEQLRSAIEVSTSDYDREKLQERLAKLSGGVAVLKIGGASEVEVG EKKDRVTDALNATKAAVEEGIVPGGGVALLYATKELEKLQTANFDQKIGVQIIQNALKTP ALTIAANAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAAS VSSLMTMTEAVVAEFPKNESASPAMGASGMGGMHF NT seq 1728 nt NT seq  +upstreamnt  +downstreamnt atgtacagactcgcatctggtttactcgcaaaatccagaatcagaaacaccagtagccag attggaagtagagtcaattggaatcggaattatgctgcaaaggatatcaggtttggcatt gatgctcgagctttaatgctcaagggtgttgaagacttagctgatgctgtaagaataacc atgggcccaaagggtcgcaatgttgttattgagcaaagttttggggcaccaaaagtaaca aaggatggagtcactgtcgccaaaagtattgagtttaaggatagagttaagaacatgggt gcaagccttgtcaagcaagttgccaatgcaacaaatgatgtagctggcgatggtaccact tgtgcaacaattcttacccgagcaatattctcagaaggttgtaaatcagttgcagctggc atgaatgctatggacttaagacgtgggatttctatggcagtagatgctgttgtaaccaac ttaaagagtagggctagaatgatcagcacatctgaggaaattgcacaggtaggtaccata tcggcaaatggtgaaagggaaattggggagttgattgcaaaggcaatggaaaaggttggc aaagaaggagtcattactattgaggatgggaagacactgtttaacgaattggaggttgtt gaaggaatgaagctcgacaggggctatatttcaccatattttataaccaatcaaaagact caaaaatgtgaacttgaggatcccctcattttgatacatgagaagaagatatcgagcatt aatgcagttgtcaaagtattggagctggctttgaagaagcaaagacctttactgattgtt gcagaagatgtagaaagtgatgcattagccacccttattctgaataagcttcgtgcaggt gtgaaggtgtgtgccattaaagcaccaggttttggagagaacagaaaagcttatctgcag gatctggctacacttactgggggggaggtcatcactgaagagcttggcttgaaccttgag aaggtggacttgaagatgcttggcagcgctaaaaaggtaactgtatcaaaggatgatact gttgttcttgatggagctggggacaaaaaagcgattgaagaaagatgtgagcagctgcgt tctgctattgaagtgagcacttcggattatgatagggagaagctccaagaacgattggca aagctttcaggaggagttgctgttctcaagattggtggagcaagtgaagtagaagtcgga gagaagaaggatagagttacagatgctcttaatgctaccaaagcggcagtagaggaaggc attgtaccaggtggtggcgttgcacttctttatgctacaaaggagcttgaaaagcttcaa actgctaattttgaccagaagattggagttcagatcatccagaatgccctcaagacacct gcactgactattgcagcgaatgctggtgtggaaggtgctgtggttgtgggcaaattactt gagcaggataaccccgacctcggctatgatgcagccaaaggggaatatgtggacatggtg aaggctggaataattgatccattgaaggtcatcagaactgccttggtggatgcggcaagt gtctcatcattgatgacaatgactgaggcagttgttgctgaatttccaaagaatgagagt gcgagcccagccatgggcgccagcggcatgggtggaatgcatttctaa

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