Amborella trichopoda: 18432816
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Entry
18432816 CDS
T02990
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18432816
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18432816
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
18432816
NCBI-ProteinID:
XP_006842980
UniProt:
W1PCA2
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MVEPSKVIHIRNVGHEISEHDLHQLVQPFGAVMKVVMLRAKNQALLQMHDVASAVNALQY
YTTVQPSIRGRNVYIQFSSHQELTTADQNGQGRNNGDQDSQTNRILLVTVHHLLYPITVE
VLHQVFSPYGYVEKIVTFQKAAGFQALIQYEAFQSAVQARTALQGRNIYDGCCQLDVQFS
NLTELQVHFNNERSRDFTNPSLPADQKGRSSQGAMQPGYNDSGGLYGIQPGGGRPVAFPQ
VGGVGLGPIQMGAASSIAAAFGGNLPPGITGTNDRCTLLVSNLNPDKIYEDKLFNLFSIY
GNILRIKMLKNKPDHALIQMGDGFQAELAVHFLKGAMLFGKPMDVNFSKHPHITPGTDTH
DYSGSTLNRFNRNAAKSYRYCCSPTKMIHISTLPPEVTEDEIVAHVEEHGTVVGSKLFEV
NGKKQALVLFDTEEQATEALVCKHATNIDHAVIRISFSQLPSL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaccttccaaagttattcacatccgtaatgttggacatgaaatatcagagcat
gacctacatcagttggtgcaaccttttggtgctgttatgaaagttgtgatgctacgtgca
aagaatcaggctcttctgcaaatgcatgatgtggcttctgctgtcaatgcattgcaatac
tatacaaccgttcagccaagtatcaggggtagaaatgtttatattcaattctcgtctcat
caagaattgacaacagcggaccaaaatggtcagggacgcaataatggggatcaggattca
cagaccaatcgaatactcttagttacagttcatcacctgctctatcctataacagtggaa
gtgctgcatcaagtgttttccccttatggttatgtggagaagattgtgacatttcagaag
gccgccggatttcaggcccttattcaatacgaagctttccaaagtgctgttcaggcccga
actgctcttcaggggcgcaatatctatgatggttgctgtcagcttgatgtccaattctca
aatctcaccgagttgcaagtgcacttcaacaatgagagatctagggacttcacaaatcct
tccttgcctgctgaccagaaaggaagatcatcacaaggagctatgcagcctggttataat
gattcagggggtctatatggcattcaacctggaggaggcaggccagtggcttttccacag
gtgggtggggttggtttgggccctatccagatgggcgctgcttcatccattgcagctgca
tttggtggaaacttgcctccaggaataactggcactaatgacagatgtactctccttgtt
tccaatctaaaccctgataaaatctatgaagataagcttttcaatctattttccatatat
ggaaatatattgcgcatcaaaatgttgaagaacaaacctgatcatgcgcttatccaaatg
ggagatggtttccaagcagaattggctgtgcacttcttgaagggagccatgctatttggg
aagcctatggatgtgaacttctcaaagcacccacacattacccctgggacggacacccat
gactactcaggctccaccctcaaccgcttcaaccgcaatgcagccaagagctatcgctac
tgctgctcacccaccaagatgatccacatctccaccctccctcccgaggtcactgaggat
gagatcgtggcccacgtcgaggagcatgggactgtggttgggagcaagctgtttgaggtg
aatggaaagaagcaggcccttgtactctttgacaccgaggagcaggccactgaggccctt
gtatgcaagcatgctaccaacattgaccatgcagtcatccgcatctccttctctcagctc
cctagcctctag
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