Amborella trichopoda: 18432983
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Entry
18432983 CDS
T02990
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18432983
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
18432983
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Other ribosome biogenesis factors
18432983
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
FtsJ
Methyltransf_31
PCMT
RrnaAD
Methyltransf_4
RsmJ
Motif
Other DBs
NCBI-GeneID:
18432983
NCBI-ProteinID:
XP_006843148
UniProt:
W1PA73
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MAAKKKPTPRRGGERSAYFARREAAKVLRSVLNGDAKRKAVASIKSLVYSPSIKNKKATF
ALVCQTLKNLPLLKKILAKSGLLKGKWKRQGELIYVVTYDVLFGQAAVSTGVAEQFVLKQ
KNALQSALVQLCAKKNVKNVEDLLKPNYRTLDHSRPRYVRVNSLKIDVGCALQELAKTNE
VKMDDLVLDLLVLPPGTDLHDHPLVLNGSVFLQSKASCMPAIALGPEPGWMVLDACSAPG
NKTAQLTALMQGRGKVIACELHKDRIKVLEDTIKRSGASNVEILHEDFLKINMREAPFSK
VRAILLDPSCSGSGTAIDRLDHLLPSYGTGLSDDDAERERAKKLAAFQSRALAHALSFPS
VERVVYSTCSIHQIENEDVVNSVLPLAASLNFELASPFPQWPRRGLPVFEGSSHLVRTDM
VQDKEGFFIALFVRKKVAIPLEETIKRVENLPESLKLNNGSRKAGPRFGGFTGSIDQAKN
STYRSQFKLPFCPFLKMSQRLLFSPEMRYKKPKNSVQYCA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagaagaagcccactcctcgtcgtggtggtgaacgctcggcttatttcgct
cgccgagaggccgccaaggtcctgcgctctgtgcttaatggagacgccaagaggaaggcc
gtcgcttcaattaagtctcttgtctatagcccctctatcaagaacaaaaaggccactttc
gctctagtttgccaaaccctaaaaaatcttccactattgaagaaaattttagcaaaatct
ggtttattgaaaggcaagtggaagaggcaaggggaattgatctatgtcgttacctatgac
gtcctctttgggcaggctgctgtctctacaggtgttgcagagcagtttgtccttaagcag
aagaatgctttgcaatccgctttagtacagctttgtgcaaagaagaatgtgaagaacgtt
gaagatttgttgaaaccaaattatcgaactcttgatcattccagaccccgatatgttcgt
gtgaattctttgaaaatagatgtaggatgtgccttacaagaattggctaaaacaaatgag
gtcaaaatggatgatttggttctagatttgctcgtgcttccaccgggaacagatttgcat
gaccatccacttgtcctaaatggaagtgttttcttgcaaagtaaggcgagttgtatgcca
gcaattgccctggggccagaacctggatggatggttcttgatgcttgttcagcaccaggt
aacaaaactgctcagcttacagcacttatgcaaggaaggggcaaggtgatagcctgtgag
ttacataaggataggataaaagtattagaagacactatcaaacgttctggagcttccaat
gtggaaattttgcacgaggatttcctgaagataaatatgagagaagcccctttttcaaag
gttcgtgccattcttttagatccttcctgctctggatctggaactgctattgacagattg
gatcatttgcttccatcttatggaacaggtctatctgatgatgatgcagaaagggaaaga
gcaaagaagttagctgcttttcaatcaagggcccttgctcatgcgctgtcatttccctca
gtcgaaagggtggtatacagcacatgctccatccatcaaattgaaaatgaggatgtcgtg
aattcagttctcccactggctgcttccctcaacttcgaattggcatctccttttccacag
tggccccgccgtggtcttccagtttttgaaggctcttcacatttggttcggacagatatg
gtgcaggataaggagggatttttcattgctttatttgttagaaagaaggtcgcaatccca
cttgaagaaaccatcaaaagagtagaaaacttgccggagtctctcaaacttaacaatggg
tcaagaaaagctggacccagatttggtggattcactggatcgattgatcaggcaaagaat
tctacgtatagaagccagttcaaattaccattctgtcctttcctcaagatgtctcaaagg
ctgctcttttcacctgaaatgaggtataaaaaaccaaaaaacagtgtacaatattgtgcc
tga
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