Amborella trichopoda: 18433019
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Entry
18433019 CDS
T02990
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18433019
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18433019
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18433019
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
18433019
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
18433019
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18433019
Prokaryotic type
18433019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
18433019
NCBI-ProteinID:
XP_006843180
UniProt:
W1PCT5
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MAENAILGFLQYNEEIPDSGRFAETLGVDHNLLVNVIKSLHGFKLVDAEDIKREKWVLTD
EGKSYTVAGSPEVQFFFAIPPEGISREELQRKIDPSVYKIGLSQAVKNKWVEVGKLLVSR
KVQHVEDRVKELLLQVQMGEALQLEEIDSLKRRKLIALQTWKGYSLRKGPNYALKRTKAA
TDLTREQLQRGEWKDLEFKDYNFSALGQPTEGGHLHPLLKVRAQFREIFLEMGFEEMPTN
NFVESSFWNFDALFQPQQHPARDSHDTFFLQVPSTTKKLPEDYLERVQKVHESGGYGSKG
YGYVWKREEAEKNLLRTHTTAVSSRMLYLLAQKPFTPKRYFSIDRVFRNEAVDRTHLAEF
HQIEGLVCDRGLTLGDLIGVLNDFFSRLGVSKLRFKPAYNPYTEPSMEIFSYHEGFKKWV
EVGNSGMFRPEMLRPMGLPEDVNVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKN
PICQLGIKQID
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgcaattctagggtttctccagtacaacgaggagataccagactctggt
cgttttgcggagactcttggcgtcgatcacaacctccttgtcaatgtcatcaagagcctt
catggtttcaagcttgtcgatgcagaggatatcaagagagagaagtgggttctcacagat
gagggcaaatcatacacagtggcgggctcccccgaagttcagtttttctttgcgattccc
cctgagggtatctctagggaagaattacagcggaagatagatccctctgtttacaaaata
ggtctttctcaagccgtgaaaaacaaatgggtggaggttgggaagctcctagtgtctaga
aaggttcaacatgttgaggatcgggtaaaagagttacttctgcaagtacagatgggagag
gcattgcaactggaagagattgattctttgaagagaaggaagttaatcgctttgcaaaca
tggaagggctactcattgagaaaaggtcccaattatgccctgaagaggactaaggcagct
actgatctaactcgtgagcaattacagaggggggaatggaaggatctggagttcaaagat
tacaacttcagtgctctaggccaacccacggaaggtggccatcttcatcctctgctgaag
gttagggctcaattcagggagatctttttggaaatgggttttgaggagatgccaaccaat
aactttgttgaaagcagcttttggaactttgatgctctcttccagccacagcaacatcca
gcccgtgactcccatgatacgttctttctacaggtaccttcgactacaaagaagctacct
gaagattatttggagagggtacagaaagttcatgaatctggtggttatggttctaaaggt
tatggatatgtttggaagagggaggaggcagagaagaacttactccgaacccacacaaca
gctgtttcctcaaggatgctttacttgcttgctcagaaacctttcacaccaaagcggtac
ttttcaatagatcgagtttttagaaatgaggcggtggatcgaactcatcttgcagagttt
caccagatagagggtcttgtttgtgatcgaggtttgactcttggagacctgattggtgtc
ttgaatgacttcttttcacgattaggcgtgtccaagctacggttcaagcctgcgtataat
ccatataccgagcctagcatggagattttcagctaccatgaagggttcaagaaatgggtg
gaggttggcaattctggcatgtttaggcctgagatgctgcgtcctatggggcttcctgag
gatgttaatgtgattgcatggggtctatctcttgaaaggcctaccatgatattgtatggc
attgacaacatccgagatctttttgggcacaaggtggatcttggtctcataaagaaaaac
cccatttgtcagcttgggataaagcaaattgattga
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