Amborella trichopoda: 18433090
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Entry
18433090 CDS
T02990
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18433090
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18433090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18433090
NCBI-ProteinID:
XP_006843250
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAMECGSEAHTIGVEGIWRRQLGLLDPRKFARRIGGSEGIIKRMSLYAKLDGHDGCVNTV
QFNPTGDLLVTGSDDRQVIFWEWAAKAKRFSYPSGHSDNVFQARIMPFTDDRSVITCAAD
GQVRHGLILENGLVDTKRLAKHQGRVHKLAIEPGSPHIFYSCGEDGVVQHFDLRSHSAAR
LFSCSSLSENKQYHSNVRLNAIVIDPRNPNYFAVGGFDEYARVYDIRSSPLDSPVNTFSP
NHLIGNDSVHITGLAYSATSELLVSYNDELIYLFQKNMGMGPNPKSLSAEKLHELDQPQV
YVGHRNARTVKGVNFFGPNDEYVVSGSDCGRIFIWKKKGGQLLWLMVGDKHVVNCLEPHP
CVTILATSGLEKNVKLWAPIAEAPIPLPDNAEQIMEANRQGREDRSRITVTPDVIMHVLR
LQRRQAMVYIERNARTDFDSDGEAEEDAYILRLFGSDASSDEGASANPKECTIS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggagtgtggatcagaggctcatacaattggggtagagggcatatggaggagg
cagcttggtttacttgaccctcgaaaatttgcgcgccgaattggtggttctgagggcatc
ataaaacggatgagtttgtatgcaaagctggatggacacgatggttgtgtaaatacagta
cagtttaatcctactggtgaccttcttgtaaccggatctgatgacaggcaggttatattc
tgggagtgggcagctaaagccaaaaggttttcgtatccttctggccactcagacaatgtc
tttcaggccaggatcatgcctttcacagatgatcgtagcgtaataacttgtgctgcagat
ggtcaggtccggcacggcttgatattggagaatgggctggtggacacgaaaagacttgcg
aagcaccagggccgtgttcacaagcttgccatagaaccaggaagtccccacatattttat
agttgtggggaagacggagttgtacagcattttgacctgcgaagtcacagcgctgccagg
cttttctcttgttcttctttgtcagaaaacaagcaatatcatagtaatgtgcgtctgaat
gcaatcgttatcgacccgcgaaatccaaactattttgcagtgggaggatttgatgaatat
gcacgtgtttatgacataaggagttccccacttgattcaccagtgaacacattctcaccc
aatcacctgattggtaatgatagtgttcacatcacagggttggcttattctgccacaagt
gaattgcttgtttcatataacgatgagcttatctatctgtttcagaagaacatgggaatg
ggtccaaacccaaagtcactatcagcggagaaattacatgagttggatcaacctcaggtg
tatgtaggccatcgcaatgcacgaactgttaaaggtgtaaatttctttggccctaatgat
gagtatgttgtgagtggatcagattgtggtcgaatattcatttggaagaagaaaggtggt
caactactatggctaatggttggtgataaacatgttgtcaactgtcttgaaccccatcct
tgtgtgaccattctagctactagtggattagagaagaatgtgaagctttgggctcctatt
gctgaggcccccattccactccctgataatgcagaacagataatggaagccaacaggcag
ggaagagaggatcgttcaaggattactgttactcctgatgttataatgcatgtattgagg
ttgcagaggaggcaggcaatggtctatattgagaggaatgcaagaacggattttgatagt
gatggagaagccgaagaagatgcttatatattaagactttttggtagtgatgcatcatca
gatgaaggggcctcagcaaatcccaaggagtgcactattagttga
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