Amborella trichopoda: 18433254
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Entry
18433254 CDS
T02990
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
atr
Amborella trichopoda
Pathway
atr03440
Homologous recombination
atr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18433254
03460 Fanconi anemia pathway
18433254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18433254
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18433254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
DUF6429
Motif
Other DBs
NCBI-GeneID:
18433254
NCBI-ProteinID:
XP_020522223
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSTILFFLFFSFFREKFRLPNSLKFCFLSFLCRGVGKWTLKLLQEFFNKDSEPLESDSDA
NATKKKGTRTKRYLPQKNSAPFALLITLYRESLNGRSSMKKQELIDATEASGLTHMPIGL
PNSSGKGGGFGGLARDWYCGWNSMKTLLTKGLVVKSSCPAKYMLSQEGQETARECLQRSG
LRDCDIPLAKKPDKSGANGEEMLVSDINKKLSKRKSVSASLELSEMMTSMEYSDKDAHLT
SSEASQMVGDKDVSSLRTCTFGHHLKMRVDALLAEPTQKISIEIHDLSDASDSGDTGPVS
LLSKRTQPRCSNESSLGTSGLRACTSSAVVGDAQGSCGNALAVPPCSPGEKFEDLYDVIL
LLDDREQFLHNNQGSLSRRVVESLCLQFKVQVEIRRLPVGDGIWIARHKCLQKEYVLDFI
VERKKVEDLRTSIRDNRYRDQKLRLLRCGLQKLIYLIEGDPNSSEAAESIKTAAFTTEIL
EGFDVQRTSSVADTVKKYGHLTHAITHYYTTQSSHSFDKSERICPSYEEFIKTCQDLEKM
TVSDVFALQLMQVPQVTEEVALAVLDMYPTVLSLARAYSEIEGDVRAQEDMLRNQSKAIG
AGASRNIYKLVWRS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattcttttctttctttttttttctttttttcgtgaaaaatttcgtttaccc
aactctctgaaattttgttttttgagttttctttgtaggggtgttggaaagtggactctt
aagctcctgcaagagttcttcaataaagattctgaacctttagaatcagacagcgatgct
aatgcaactaagaagaaaggcacaagaaccaagcgatatttgcctcagaaaaactctgct
ccttttgctttattgattaccctttacagggaaagtttgaatgggaggagttctatgaag
aaacaggagcttattgatgcaactgaagccagtgggcttacacacatgccaattggattg
ccaaatagcagtgggaaaggtggaggttttggtggtttagcaagagattggtattgtgga
tggaatagcatgaagacattgcttacaaaaggactagttgtcaagtcaagttgcccagct
aagtatatgttatctcaagagggtcaagaaactgcccgagaatgcctccagaggtctggg
cttcgtgattgtgatatacctttggctaagaaaccggataagtctggcgcaaatggagaa
gagatgttggtgtctgatattaacaaaaagcttagcaagagaaaatcagtatctgcatca
ttggagttatctgagatgatgacatccatggagtattctgataaggatgctcatctaact
tcttcagaagcatcacaaatggtgggagataaagatgtatcatcacttaggacttgcact
tttggccatcacttaaaaatgcgggtcgatgcattgcttgcggaacccacccaaaagatt
agcatagagattcatgatctttcagatgcttctgactctggagatactggtccggtgtct
ttgttatctaaacgtacacaacctcgttgttctaatgaatcaagtcttgggacttccggt
ttgagggcttgcacatcttctgcagtggttggtgatgcacaaggttcttgtggaaatgcc
ttagcagtgccaccatgcagtcctggagaaaaatttgaggacctatatgatgtaattttg
ttattagatgatcgagagcagttcctacacaataatcaagggtctctctctagaagggtt
gttgaaagtttatgtttgcaattcaaagtccaagttgagatacgacgtcttcctgttgga
gatgggatctggatagctcggcataagtgtctacaaaaggaatatgtgctggattttatt
gttgaaagaaagaaagttgaggacctacgcacctccattagggacaaccgttatagagat
cagaaactcaggcttttgagatgtggacttcagaaactgatttacctgatagaaggtgat
ccaaactcctctgaagcagccgaaagcatcaaaacagctgccttcacaacagaaattttg
gaaggctttgatgtgcaaagaaccagtagtgtagctgatacggtaaagaaatatggccat
ttgacacatgcaataacccattattacacgacacagtcttcccatagctttgataaaagc
gaaagaatctgtccttcgtatgaagagtttatcaaaacgtgccaagatcttgagaaaatg
acagttagtgatgtgtttgctcttcaattaatgcaggttccacaggtcacagaggaggtt
gcccttgctgttctagacatgtatccaacagttctttctcttgcacgtgcctactcagag
attgagggtgatgtccgagctcaagaagacatgctaaggaatcagagtaaggcaattggt
gcaggggctagtaggaacatctacaagctggtttggaggagttaa
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