Amborella trichopoda: 18433437
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Entry
18433437 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18433437 isoform X2
KO
K08518
syntaxin-binding protein 5
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18433437
Membrane trafficking [BR:
atr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
18433437
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
18433437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WDR55
PEP5_VPS11_N
Beta-prop_HPS5
Synaptobrevin
TFIIIC_delta
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
18433437
NCBI-ProteinID:
XP_011623149
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MFPKRLLQKAMHQHVINQGGLSSTDLNIQMILHYGIPSTASILAFDPIQRILAIGTLDGR
IKIIGGDNIECLLVSPIKAPYKHLEFLHNQGYVVSVSNENDIRVWDLEHRHVACYLQWES
NITAFSVIQGTAFMYVGDEYGVMSVLRFDVEEAKLLLLPYRIPATVALDAAKISVTLHPS
VVGVFPQPCIANRRVLIAYDNGLIILWDVSEDRIVLVRGYTDLQAKNEGGAKNQSSTETE
TCGQSSDLDHEEKEICSLCWASADGSVLAVGYTDGDVLFWNISSGSSTKEEKVAVLSSNV
VKLQLSSGKRRIPVIVLHWSATKKSKNGCGGQLYIYGGDEIGSEEVLTVLSLEWSSRLES
LRCVSRLDLTLHGSFADMILLPGGGSTLMDPAASLFVLTNPGQLHAYDGTSLCTLSSPQE
EKPQIQPEPFPELIPLLDPCITVGKLITLPKGGNYSKILSEVASAGKGQPLPVLPAGTNW
PLTGGVPSTALGEGLGIERMYVAGYQDGSVRIWDATNPVFSILFVLEGEINGIKVPGDRA
PVSALEFCCVSGSLAVGNECGLVRVYTLVGGSGEMGCQFVSETVSEAHSLHYEGFHCAAM
FSVLKSSISALTYSTSGGHIAVGCGNGQVSMLDIRSFLVLFLTDSIPGSSTSVISVILKS
FKPLDSPVNSPKVVESKSPKQDSTAGSEFLFVLTRNARIVIFNGLSGSMISSRPVHPKSE
SIAVAMHIIDGGNSISGLKKDKHSKQLFMEDTSQMDSKGSDSPSGSKSGDELLHLEETTS
YSEQRLMNPLLLLCCEDALRLYGLSSVIQGENNSIYKASLGQPCCWSATFRSKEENAYGL
ILLYQNGLLEIRSLPNFAVIEESSLMSILRWNFKTNFAKTMSSTENGHVTLINGSELAIV
SILASENAFRIPDSLPSLHDEVLAAAADAAINSSVQQIKKQVPSQGILGGIIKGIKAGKV
GNAMGNSTLDLISIFSRNPFADQSTKVTDDVDVEILSIDDIEIDDALPMETTMDAHTTRK
VNKRDEEAEREQLFHGAKEPMKPRLRRPEEIMAHYRKAGDASEAAGRAREKLLQRQEKLQ
RISKRTEDLQNDAESFASMANELVKAMEEKKWWKI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaagcgtttgttgcagaaggccatgcatcagcatgtgataaatcaaggaggc
ttgagctcaactgacttgaacattcaaatgattctacactatggaattccatctactgca
tcaattttggcttttgatcccattcaaagaattttggctattggaactctggatggaaga
ataaaaattataggtggggataatattgaatgccttcttgtatcaccgatcaaggcccct
tataaacatttggagttcttgcataatcaaggctatgttgtgagtgtctcaaatgaaaat
gacatccgggtctgggatcttgaacacaggcatgtggcatgttatttacaatgggaatcc
aatataactgcattttctgtaattcaaggcactgctttcatgtatgttggggatgaatat
ggggtaatgtctgtgttgagatttgatgtggaagaagcaaagctcttgctgttaccatac
cggattccagcaactgttgcgttagatgctgcaaaaatatctgtaactttgcacccctct
gttgttggtgtctttccacaaccatgtattgcaaatcgtagggtacttatagcttatgac
aatggcttgatcattctctgggatgttagtgaagatcgcattgttctggtcagaggttac
actgatcttcaagcgaagaatgagggtggtgctaaaaatcaaagtagcactgaaactgaa
acctgtggtcagagttctgatcttgatcacgaggagaaggagatatgctccctctgttgg
gcatcggcagatgggtctgtgcttgctgtgggttacactgatggagatgttctcttttgg
aatatttcatcaggttcaagcacaaaggaagaaaaagtggctgtgttatctagtaatgtt
gtcaagcttcagttatcttctggaaagagaaggattcctgtcattgttttacactggagt
gccactaagaaatccaagaatggctgtggtggccaactttatatttacggtggtgatgaa
ataggatctgaggaagtcctgacggttttgagtctcgagtggtcttcaaggttggagagt
ttaagatgtgtctctcgtctggatcttacacttcatggatcttttgctgacatgattttg
ctgcctggtggtgggtccactttgatggatccagctgcatctctatttgtgttaacaaac
ccaggacagttgcatgcatatgacggtaccagcttgtgtacattatcttcaccacaggag
gagaaacctcaaatccagccagagccctttccagagctcattcctttgcttgatccttgc
ataactgtgggaaagcttattacacttcccaagggtggaaactattcaaaaatactatct
gaggttgcttcagcagggaaaggtcaaccactacctgttctaccagctggtacaaattgg
cctttgactggtggagttcccagtacagctcttggtgaaggtttagggattgaacggatg
tatgtagctggatatcaagatggatctgtacggatatgggatgcaacaaatcctgtgttt
tctattctttttgttctagaaggcgagataaatggaatcaaagtgcctggtgaccgtgct
ccagtttctgctttggaattttgttgtgtctcagggagtcttgctgttggcaatgaatgt
ggactggtccgagtatatacactagtaggaggctctggtgaaatgggctgtcagtttgtg
agtgaaacagtgagtgaagctcatagtttacactatgaaggatttcattgtgcagcaatg
ttttcagtacttaaatcctctattagtgctcttacatattcaaccagcggaggtcatatt
gctgttggatgtggaaatggccaggtttccatgcttgacattagatcattcttagttttg
tttctgacagactccatacctggctcaagcacctcggttatttcagtgattttaaaatca
tttaaacctttagatagtccagtaaatagtccaaaagtcgtggaatccaaaagtcctaag
caggattcaactgcaggctctgaattcttgtttgtcctaacaaggaatgcccgcatagtt
atcttcaatggccttagtggtagtatgataagctcccgaccagtgcatccgaaaagtgaa
tcaattgctgtcgctatgcatatcattgatggtggtaattctatctctggcttgaaaaaa
gataagcactcaaagcaattgtttatggaggacaccagtcaaatggattctaaaggaagt
gattctccttctggaagcaagtcaggagatgaactgctgcacttggaagaaaccacatca
tattcagaacagagacttatgaatcctcttctcttactatgttgtgaagatgcattgcgg
ctgtacggtttgtcatcggtgatacagggggaaaacaattccatttacaaagcaagttta
ggacaaccttgctgttggtcagcaactttcagaagcaaagaggaaaatgcatacggactg
atcttactttaccagaatggactcctggagataagatctttaccaaattttgcagtgata
gaggagagttctttgatgtccatattaagatggaacttcaagacaaattttgctaagaca
atgtcttctacagaaaatggacatgttaccttgataaatgggagtgagttggctatcgtt
tctattttggcgagtgaaaatgctttcaggattcctgattcattgcccagtctacatgat
gaagttcttgctgctgctgctgatgctgccattaattcttctgtgcaacagattaaaaaa
caggttccttctcaagggattttgggtggcattatcaagggcattaaagcagggaaagtg
gggaatgcaatggggaattcaactctagatctaattagtatattttctagaaatccattt
gcagatcaatctacaaaagttacggatgatgtagatgttgaaattctgagtattgatgac
attgaaattgatgatgccctacccatggaaacaaccatggatgcacatactacaaggaaa
gtgaataagagagatgaggaagctgaaagggaacaattattccatggagcaaaggaaccg
atgaagcctagactgaggcgacctgaggaaattatggcccactacaggaaagcaggggat
gcctctgaggctgcaggacgtgctagagaaaagcttttacagcgccaagaaaaacttcag
agaattagcaaacgtacagaagatctccaaaatgatgcagagagttttgcctctatggcg
aatgagctcgtcaaggcaatggaagagaaaaaatggtggaaaatatga
DBGET
integrated database retrieval system
