Amborella trichopoda: 18433774
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Entry
18433774 CDS
T02990
Name
(RefSeq) oligouridylate-binding protein 1 isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18433774
03041 Spliceosome [BR:
atr03041
]
18433774
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
18433774
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18433774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_Nup35
Dynactin_p62
Motif
Other DBs
NCBI-GeneID:
18433774
NCBI-ProteinID:
XP_006843917
UniProt:
W1P6S7
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MQQRMKQQALLQQTFLQQQQQSMYHPNLLAQMSQIEPIPSGNLPPGFDSSSCRSVYVGNI
HVNVTEAMLQEVFQSAGPLEGCKLIRKEKSSYGFVDYYDRRSAALAMLTLNGRLLFGQPI
KVNWAFTSAHREDTSGHYNIFVGDLSSDVTDATLFACFSTYSSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQNAINEQNGKWLGSRQIRCNWAAKGAGINDDKQNSDAKSVVELTNGTS
EGSQEAPNEDAPENNPAYTTVYVGNLAPEVSQLELHRQFHALGAGVIEEVRVQRDKGFGF
VRYSNHSEAALAIQIGNGRILCGKPIKCSWGNKPTPPGASSTPLPPPAAPLPMLSPSDLL
AYERHLALNKMGMNMIPPQHPLKPTSAPMTAGASQAIYDGGFQNVAAAQQLMYYQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagagaatgaagcagcaagctcttttgcaacaaaccttccttcaacaacagcag
cagtctatgtatcacccaaacctcctcgcccaaatgtcacagattgagccgatcccaagc
ggaaatctgcctcctgggttcgattcgagttcatgccgcagtgtatatgtgggaaacatt
catgtcaatgtcacagaagccatgcttcaagaggttttccagagtgctggcccattggaa
ggatgtaaactcatcagaaaggaaaagtcatcctacggttttgtggattactatgaccgc
agatctgctgctctggcgatgttgactttaaatggaaggcttctgtttggtcagccaatt
aaagttaactgggcatttacaagtgctcatagggaggatacatcagggcactacaacatt
tttgttggtgatcttagttctgatgttactgatgccacactttttgcgtgtttctcaact
tacagcagctgttcagatgcacgagttatgtgggatcagaaaactggacgttctagaggc
tttggatttgtttctttccgtaatcagcaggatgcgcagaatgctataaatgagcagaat
ggaaagtggcttggcagtagacagatccgttgcaactgggcagcaaagggtgcgggtatt
aatgatgacaagcaaaactctgatgccaaaagcgtggtggagctcactaatgggacatca
gaaggcagccaagaggcgccaaatgaagatgctccagagaataatcctgcatatactact
gtatatgttggcaatctagcccctgaggtttctcagcttgagctccatcgtcaattccat
gcgcttggtgctggggtgattgaggaagtgcgagtccagagagacaaagggtttggattt
gtgaggtacagtaaccattcggaagcggcattagcaattcagattggcaatggaaggatc
ctttgtggaaagcctatcaagtgttcatggggtaacaagccgacgcctcctggtgcaagc
tcgacacctctcccgccccccgcagctccactcccgatgctgtcgccatctgatctgttg
gcatatgagcgtcacttggccctgaacaagatgggtatgaatatgatacccccccaacac
cccttgaagcctactagtgcccccatgactgccggggccagccaggccatctacgatggt
ggcttccaaaacgtcgctgctgctcagcagctcatgtactatcagtag
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