Amborella trichopoda: 18433987
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Entry
18433987 CDS
T02990
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18433987
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
18433987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Ctf4_C
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Tricorn_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_ELP1_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
18433987
NCBI-ProteinID:
XP_011623322
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MGESSKGLCTILGSDPNRGGERLTDIHFLQFAILYSAGEFQSNVTRFTLPIRCIAFNKSG
SLLAAAGDDEGIKLIATIDSSISRVLKGHKGSITSVSFDPKDEYLASIDEFGTVIYWDLS
TGKSIHNLPKISPTSIPDMGSLNVISWSPDGEMLAVPGVKNDVVMYDRDTSEKLFSLKGG
HLKPVCFISWSPNGKYMATSGLDSQVLLWEVENKQDIDRQKFEYQVCGLSWKPEGNALAV
IDVMGRYGIWDSVIPSHMKSPSDGAPKFRVRISDGFLLNDEERLEQANSGCSDQIGEDSN
GELVPNGLSRLRREGLVGSDSDEESDGEVGLISLRKTRKKTLIKHRESSVDGGEFVSVNK
PERSKSSMQEAFQSGSTPIQAGTRCFLCYNMLGSITSLKNDGFSHIEVDFHDTGRSSRIP
SLTDYFGFTMASLNENGSVFANGRKIGKNISTLMYRPFASWANNSEWSMRFEGDEEVKAV
ALGSGWVAAVTNLNYLRIFSEGGLQKCILSLDGPVATAAGLKDELAIVTHASQSLPSGDQ
MLEVQVFNVANSTKVFEGRLPLTPGSHLTWLGFSEEGFLSSYDSKGVLKVFTKHHGGSWI
PLFSAAKERKSEKDYYWVVGLNATKVFCVVCKSPETYPQVTPKPVLTLFNVSFPLASSDL
GAEDLENEFMMRGFNLLQAQRILEETAATGQDTTSLDDEVFNMEAALDRCILRLIASCCK
GDKLVRAAELAGLLSLEKSLKGAIKLATAMKLPILAERFHGMAEEKMLSEALAEDHVTVH
GGIEPSRKCVPNIARTLPPQPVISLPSPVFSLKEKPEKKTATEFKTMEASGRSDENGSKM
KFSSMVSRRNLSVKDPNIKFKSMESSENAKVKDLNLGDDQAKVPKPSNPFAKAPSEQDKS
SLFDSIKQMKVEDMGKEGQKRKERTVSLDQFSVAKKAR
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatcttccaagggcctttgcactattcttgggtctgatccaaatagaggtggt
gaacgtttgactgatatccatttcctacaatttgctattttgtattcagctggcgagttt
caaagcaatgtaactcggtttaccctcccgattcgctgcattgctttcaacaaatcaggc
agcctcttagcagctgcaggagatgatgaaggcatcaaattgatagccactatagacagt
tcaatatcaagggttctcaagggtcacaaaggctccataaccagcgtgtcttttgaccca
aaggatgaatatttagcttctatagatgaatttggaactgtaatttattgggacctctct
acaggcaaatctatacataacctcccaaaaatatccccgacttcaattccagacatgggt
tctttgaatgttattagctggagccctgatggtgaaatgcttgctgttcctggtgtgaaa
aatgatgtggtaatgtatgatcgggacacatctgagaagctcttttcgcttaaaggtggc
caccttaaacctgtgtgtttcatttcgtggtccccaaacgggaaatacatggcaacctct
ggtttagattctcaggtcttgttatgggaagtggaaaacaaacaggacattgatagacaa
aaatttgaataccaagtttgtgggttgagttggaagccagaaggaaatgctttggcagtt
atcgatgtcatgggtcgatatgggatctgggactctgttattccttcgcacatgaagtcc
ccttctgatggtgctccaaaatttagagtgagaatttcagatgggtttttgttgaatgat
gaggagaggctagaacaagccaattctggttgttctgaccaaattggagaagatagcaat
ggtgaattggttcccaatggtttgagtcgtttgcgtagagagggtttggttgggagtgat
tcagatgaagaaagtgatggtgaggtgggtttaatttctctgcgcaagactaggaagaag
acccttattaagcatcgggaaagttcagtggatggtggggaatttgtgagtgtaaataaa
ccagagcgatcaaaatcctcgatgcaagaggcttttcagtctggctccactccaatacag
gctgggacacgttgttttctctgctataatatgcttggaagcatcaccagtcttaagaat
gatgggttctctcatatcgaggttgatttccatgatacagggaggagttctaggatacct
tcattgactgactattttggttttaccatggcttcacttaatgagaatgggagtgttttt
gctaatggtcgcaagattgggaaaaatataagcacgctcatgtatcggccattcgctagc
tgggcaaataacagcgagtggtctatgcggtttgagggtgatgaagaagtgaaggctgtt
gcacttggttcaggttgggtcgcagctgtgaccaaccttaattatcttcgcatattcagt
gagggcggcttgcagaaatgcattctctctctggatggtcctgtagcgacggctgcaggc
ctcaaggatgagcttgcgattgtcacacatgcctcccaaagccttccttctggagatcag
atgttagaagttcaagtattcaatgtagctaatagcacgaaggtttttgaaggtcggctt
ccactaactcctggttcacatctcacctggcttgggtttagtgaagaaggcttcctaagt
tcatacgattccaagggggttcttaaagtctttacaaaacatcatggaggcagttggatt
ccactcttcagtgctgctaaagagcggaagtctgagaaggattactattgggttgttgga
ttaaacgcaacgaaggtgttctgtgttgtctgtaaatcacctgaaacatatccacaggtg
acacccaagcctgtccttacactcttcaatgtgtcgtttcctttggcatcatctgatctt
ggtgccgaagatcttgaaaatgagtttatgatgcgtggcttcaatcttttacaggctcag
agaattcttgaagaaacagcagctacaggtcaagacaccacgtcacttgatgatgaagtt
ttcaatatggaagctgctcttgaccgttgtatattaaggcttatagccagctgttgcaaa
ggtgataagctagtgagagctgcagaactggctgggctgctatcactggagaaatctttg
aagggtgcaataaagcttgctactgccatgaagcttccaatactagctgagcgatttcat
ggcatggcggaggaaaaaatgcttagtgaggccctggcagaagaccatgtgactgtgcat
ggtggcattgaacctagtagaaaatgtgtaccaaatattgcaaggactctacctccacag
cctgtaatatcattaccttccccggtattttcactgaaggagaaaccagaaaagaagact
gcaaccgaatttaaaacaatggaagctagtgggaggtcagatgaaaatggttccaaaatg
aaattcagtagcatggtcagtcgtaggaatttaagtgtaaaggatcccaatatcaaattc
aagagcatggaaagtagtgagaatgcaaaggtcaaagatttaaatcttggtgatgatcaa
gcaaaggttcccaagccctctaatccatttgccaaagcacccagtgagcaagacaagtct
tcgttgtttgattctatcaagcagatgaaggttgaggatatgggtaaagaaggccaaaaa
aggaaagagaggactgtgtctcttgatcaattttctgttgccaaaaaagcaagatag
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