Amborella trichopoda: 18434085
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Entry
18434085 CDS
T02990
Name
(RefSeq) RNA-binding protein 25 isoform X2
KO
K12822
RNA-binding protein 25
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18434085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18434085
Spliceosome [BR:
atr03041
]
Complex A
U1 snRNP components
U1 related factors
18434085
Complex B
18434085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
DUF6913
Nrap_D5
Motif
Other DBs
NCBI-GeneID:
18434085
NCBI-ProteinID:
XP_006844223
UniProt:
W1PD68
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MAVSPSSPSMAGVKPDPQPESQIPPLSTNPDPLLPTPSSSSSISATTPLFQQNPNPSSTP
NPSPIHSSIQAVTPSPAASGSLPAVSPSPPVPPAPSFRPMTPQFSPIRPPGIFAMTGTPQ
FQANPMPFVQAPNGFMPMHVPVPGSSAPAMASAGIPRYPTPFVTMIRPGFPPRPPTAMGA
MPPLSRPPMPGIRVVPPIMSPPVRPAVPIIPMMEKPQTTVYVGKIATTVENDFLLSLLRL
CGPVKSWKRAQDPSNGAPKGFGFCEFESAEGVLRALRLLSKFNVDGQELVLNVNQATRDY
LERYVEKKIEREKQTKEAGNGNAAKEEETAPGVEKNDEQKTLSEELNKETDESNDKANKQ
DTANFGIVTDEDREGDKDALEKLANMMEERSKTRPLPPPPIPAPGDPSGKSNSEVPTRSR
DGDSDVDIVKSDMAEDKNDDETTSENKTHDHERPETSSSDRGRRHDRGRERDREQDLKRE
KERELERYERERERERLRREREREQRIREAERIYKERVKEWESREREKEYQRLHEKEREK
ERERERRREIKDQEEESDEDDTRKRRHRSSVYEEKRKKRQRERDDDMADRLREEEEIAEA
KRRALEEQDKTEEPVLVNGSENLQKPVEENNIKVRGNSAEPAEENSLGDENRTGDVAPRN
GNVSFSGDEPIVDSSSASDTRQNSIAPTRKLGFGLMGSGKRTFVPSVFHEDDDEETHKEK
KMRPLVPIDYSTEELEAGQASMTSGPSPNLAAAAEFAKKISNVTPKEERVDYEKDRTRRS
SDRSGQRDRERNEDESKERSRDRENGLDKPKPIENQKLLDAKQLIDMIPKTKEELFSYDI
NWEVYDKHELHHRMRPWISKKITEFLGEEEATLVDFIVSSTRDHVKASQMLELLQAILDD
EAEMFVLKMWRMLIFEIKKVETGLSMKTKA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccccgtcttccccctcaatggcgggagtaaaaccagaccctcaacctgaa
tcacaaatccctcctctctcaacaaatccagatccccttcttcctaccccttcttcctct
tcttcaatatctgcaactaccccattatttcagcaaaaccctaacccgagctcaactcca
aaccctagccctatccattcttcgattcaggccgttaccccatctcctgcggcctccggt
tctcttcctgctgtttctccttctccgcctgttcctcctgctccatcatttcgccctatg
acccctcaattctcgcctatcaggcctcctggtatcttcgccatgaccggtacccctcag
tttcaggcaaaccctatgccatttgtgcaggcacctaacggctttatgcctatgcatgtt
cctgttcctggttcttcggccccagccatggcttctgcaggcattcctcgttatcctact
ccattcgtgactatgattcggcctggtttccctccacgcccacccactgcaatgggtgct
atgccacctctttcacggccccctatgccagggatacgtgttgtccctcctattatgagc
cctccagttaggcctgccgttccgattatacccatgatggagaagccacaaacaacagtt
tatgtgggcaagatagcgaccactgtggaaaacgactttttactctcacttcttcgtctt
tgtgggccagtcaagagttggaaacgtgctcaagatccgtccaatggggctccaaagggt
tttggattttgcgagtttgagtctgctgaaggggtgcttcgtgcgctgcgtctgttgagt
aaatttaatgtcgacggtcaagaactagtgctaaatgtgaatcaggcgactagggattat
ctcgaacgttacgtcgagaagaaaattgagagggagaaacaaacgaaggaagctggaaat
ggaaatgctgcaaaagaggaagagactgcgcctggtgttgagaagaacgatgagcagaaa
actttgtcggaagagctaaacaaggaaactgatgaatcaaatgacaaagctaataagcaa
gacactgccaactttggtattgtgacagatgaggatcgtgaaggtgacaaggatgctctc
gagaagctcgcaaatatgatggaggagaggtccaagaccagacccctcccccctccaccc
attccagctcctggagatccttctggcaagtcaaattccgaagtgcccacgaggtcccgg
gatggggattctgatgtagatattgtgaaaagtgatatggctgaagacaagaatgatgat
gagacaactagtgaaaacaaaacccatgaccatgaaaggcctgagacaagctcgtcagat
cggggtagaaggcatgataggggcagggagagggacagggagcaggacctcaagagagaa
aaggagcgagaattggagaggtatgagagggagagggaaagggagaggttaagaagagag
agggagagggagcagaggatccgtgaggctgagcgtatttataaggagcgagtgaaggag
tgggagtctcgagagagagagaaagaatatcaacggctgcatgagaaggagagagaaaag
gaaagggagcgagagcgtcgaagagaaattaaggatcaagaagaagagagtgatgaggat
gatacaaggaagcggaggcataggagcagtgtttatgaggagaaacgtaaaaagaggcag
cgagaaagagacgacgatatggccgatagattgagagaagaggaggagattgcagaagca
aaaaggagagctttagaagagcaggataagacagaggaacctgtcttagtcaatggtagt
gagaatctgcagaagcctgtggaagaaaacaacatcaaggtcagaggaaattctgctgag
cctgctgaagagaacagcttgggggatgaaaatcgcacgggggatgtggctccgaggaac
ggaaatgtaagtttctccggtgatgaaccgattgtggattcctctagtgcttcagataca
aggcagaatagcattgctcctactcgaaaactagggtttgggctcatgggttctggtaaa
aggacgttcgttccttctgttttccatgaggatgatgatgaggaaacccataaggagaag
aagatgaggcctttagtgcccattgactactctactgaggaattggaggctggtcaagca
tcaatgacatcagggccatccccaaatttggcagccgctgctgaatttgctaagaaaatc
tctaatgtaaccccaaaagaagagagagtagactatgagaaggacaggactcgacgttcc
agtgataggtcaggtcagagagacagggagcgaaatgaagatgagagtaaggagaggtcg
cgtgaccgggaaaatggtcttgacaagccgaagccaattgaaaaccagaagctattggat
gcgaagcaattgatagatatgatccctaagactaaagaggagctgttctcttacgacatc
aactgggaggtttatgacaagcacgagctgcatcacagaatgaggccatggatctcaaag
aagatcaccgagtttcttggggaagaagaagccactttggtagactttattgtttcaagt
accagggaccacgtgaaggcatcccaaatgctggagctgcttcaagccatcttggatgat
gaggctgagatgtttgtactaaagatgtggagaatgctcatatttgaaatcaagaaggtt
gaaactggcctctccatgaagacaaaggcctga
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