KEGG   Amborella trichopoda: 18434100
Entry
18434100          CDS       T02990                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
atr  Amborella trichopoda
Pathway
atr03060  Protein export
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    18434100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:atr02044]
    18434100
Enzymes [BR:atr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     18434100
Secretion system [BR:atr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   18434100
  Eukaryotic Sec-SRP protein
   18434100
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 ResIII CLP1_P AAA_19 AAA_33 nSTAND_NTPase5 SRPRB GTP_EFTU MMR_HSR1 AAA_17 MeaB AAA_22 ATP_bind_1 Fe-ADH CCDC93_CC CbiA APS_kinase UvrD-helicase AAA_16 Methyltransf_24
Other DBs
NCBI-GeneID: 18434100
NCBI-ProteinID: XP_006844238
UniProt: W1PD82
LinkDB
Position
Unknown
AA seq 495 aa
MVLAQLGGSIARALQQMSNATIIDEKVLSDCLNEISRALLQADVQFKMVREMQLNIKRIV
SFDELAAGHNKRRIIQKAIFDELCNMLDPGKPSYTPKKGKTSVVMFVGLQGSGKTTTCTK
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVDTFK
KENCDLLIIDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFRQNV
PVGAVIVTKMDGHAKGGGALSAVAATKSPITFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
SGFMEKIHEVVPTDQQPELLQKLSEGTFTLRIMYEQFQNILNMGSLGQVFSMMPGFNAEF
MPKGHEKESQARIKRFMTMMDSMTNEELDSSNPKLFNESRIMRIARGSGRSVGEVMEMVE
EYKRLAKLWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM
GGSKDLSSMFGGGDR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggtgttagcacagttaggggggagcatcgcgcgtgctcttcaacagatgagcaatgcg
acgattattgacgagaaggtgcttagtgattgcctgaacgagatctccagggctctcctc
caggccgatgtccagttcaagatggtgagggagatgcagctcaatatcaagcgtattgtc
agcttcgatgaactagctgctggccacaacaagcgtcgtataattcagaaggctattttt
gatgagctgtgtaatatgttggatcctggaaagccatcatatactccaaagaaaggaaaa
acaagtgttgtcatgtttgttggtttgcaaggctcagggaaaactaccacttgtacaaaa
tatgcctactatcaccagaaaaagggttggaaaccagctttggtttgcgcagatacattt
agagctggcgcctttgatcaattgaagcagaatgctactaaggctaagattcccttttat
ggaagctatatggagtccgatcctgtaaaaattgcagtagaaggtgtagacacgtttaag
aaagagaactgtgatcttcttatcatagacaccagtggacgccataagcaggaagccgcg
ctgtttgaagaaatgcgccaagtgtcagaagctacgaaaccagatcttgtgatatttgtg
atggacagcagtataggtcaagctgcatttgatcaagcccaagcctttaggcagaatgtt
ccagttggggctgtaattgttaccaaaatggatggtcatgctaaaggaggtggagctctt
agtgcagtggcagccacaaagagtccaattacattcatcggaactggtgaacacatggat
gagtttgaagtttttgatgttaaaccctttgttagtcgccttttgggcatgggggattgg
tcaggatttatggagaaaattcatgaagttgtgcctacggatcagcaacctgaactttta
cagaagctctctgaggggaccttcactttaagaatcatgtatgagcagtttcagaatata
ctaaatatggggtcacttggccaggttttctctatgatgcctggatttaatgcagagttc
atgccaaaaggccatgagaaggaaagccaagcacggatcaaacgatttatgaccatgatg
gattccatgactaatgaagagcttgatagttcaaatccaaagctctttaatgagtctcga
atcatgaggatagcccggggctctggccgaagcgtcggggaagtgatggagatggtggag
gaatacaagcggcttgccaagttatggagcaagatgaagggcctcaagattccgaagaag
ggggagatgagtgctctttcacgaaacatgaatgcacagcacatgagtaaagtccttcct
ccccagatgttgaagcaaattgggggaatgggtggccttcaaaatttaatgaagcagatg
ggcggctcaaaagacttgagcagcatgtttggaggtggtgacagatga

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