Amborella trichopoda: 18434132
Help
Entry
18434132 CDS
T02990
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
atr
Amborella trichopoda
Pathway
atr00740
Riboflavin metabolism
atr00790
Folate biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
18434132
00790 Folate biosynthesis
18434132
Enzymes [BR:
atr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
18434132
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
18434132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
AAA_17
Motif
Other DBs
NCBI-GeneID:
18434132
NCBI-ProteinID:
XP_020522824
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MDCSPLFLHSSYPTTTHIRSCHCPYAGVHSVGLQLNLKGQSLFACRVQGTSENVDSSIAG
VSSSSSNYLGDENGSLFGGLDEEKVTSFTTLTAEITPETTDFFVSDAEDDPDCPSEGFSS
IDQAIDALSQGKFIIAVDDEGDDIEGDLIMAASFVTPQAVAFMIRHGCGIVSVAMKEEDL
ERLKLPMMFPDNDNEETFHKSFTISVDAKGGKSAGVSAFDRAKTILSLASSDSKPDDFRK
PGHVFPLKYRNGGVLKRAGHTEASVDLVTLAGLKPLSAICGILDPNDGSMAQLSQLKKIA
EEYSLPIISITDLIRYRRKREKLVERIVVSRLPTKWGLFQAYCYRSKLDGFEHIALVKGN
IGNGQDVLVRVHSECLTGDIFGSARCDCGNQLSLAMQLIEQAGRGVVVYLRGHEGRGIGL
GHKLRAYNLQDEGHDTVEANLQLGFSADSREYGIGAQILRDIGVRTMQLMTNNPAKFTGL
KGYGLAVVGRVPVISLITAENQRYLETKRVKMGHVYGSDLPSTVAVDVDTDNPAKDTL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggattgctccccacttttcctccactcttcttatccaacaaccacccacattagaagc
tgccattgtccttatgctggtgtacacagtgttgggcttcaattgaatctgaagggtcaa
tctttatttgcttgtcgagtccagggcacaagtgaaaatgtggattcgagcattgctggt
gtttcttcttcttcttccaattatttgggagatgaaaatggttctctctttggtggtttg
gatgaggagaaggtcacttcttttactactttaactgcagaaatcacccctgaaacaaca
gatttctttgttagtgacgcggaggatgaccctgactgcccatcagagggtttttcttcg
atagaccaagctattgatgcacttagtcaaggaaagtttattattgctgtagatgatgaa
ggggatgacattgaaggggatcttataatggcagcatcttttgtaaccccacaggctgtg
gcttttatgattcgtcatgggtgtggtattgtttctgttgcaatgaaggaggaggatttg
gagagactcaagttacccatgatgtttcctgacaatgacaatgaggagacatttcacaag
tcttttacaatttcagtggatgcaaagggtggaaaatctgctggtgtttcagcctttgat
agggcaaagactattctttctcttgcatcttctgattcaaaaccagatgattttagaaaa
cctggacatgtatttcctttgaagtatagaaatggtggtgtccttaaaagagctgggcat
actgaggcttcggttgatttagttaccttggctggcttaaaaccattatctgccatttgt
gggattcttgatcccaatgatggttcaatggcccaattgtcccagttaaagaagattgca
gaggagtatagcttaccaatcatatcaatcacggaccttatcaggtatcggagaaaacgt
gaaaaactagttgaaaggattgttgtttcacgtttacccacaaaatggggtctatttcag
gcatattgttataggtcaaagttagatggattcgagcatattgctcttgtaaagggaaat
attgggaatgggcaagatgtcctagtaagagtacactcagaatgcttaactggtgatatt
tttggatctgctcgttgtgattgcggaaatcaattatcattggcgatgcaactgattgag
caggctggtaggggggttgttgtttatcttcgtggtcatgaaggaagagggatcggttta
ggtcacaaacttcgtgcatacaatcttcaggatgaaggacacgatactgtggaagccaat
ttgcaacttgggttctctgctgattctcgtgaatatggtattggtgcacagatactacgg
gacattggcgtgcgtactatgcaactgatgactaacaatccagccaagttcactggcttg
aaaggatacgggttggcagtggtgggccgcgtgcctgttatctcactcatcacagccgaa
aaccagaggtacttggagactaaacgcgtaaagatgggccatgtgtatggctccgatttg
ccaagcaccgttgccgtggatgtagatactgacaatccagcaaaagatacactataa
DBGET
integrated database retrieval system
