Amborella trichopoda: 18434139
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Entry
18434139 CDS
T02990
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
atr
Amborella trichopoda
Pathway
atr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18434139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18434139
04147 Exosome [BR:
atr04147
]
18434139
04090 CD molecules [BR:
atr04090
]
18434139
Enzymes [BR:
atr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
18434139
Transporters [BR:
atr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
18434139
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18434139
CD molecules [BR:
atr04090
]
Proteins
18434139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_23
AAA_22
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
18434139
NCBI-ProteinID:
XP_006844278
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDSNAEAVQVEEEGGMEEAEEMEPPP
AAVPFSRLFAFADGFDWLLMVVGSLAAAAHGTALVVYLHFFGKIVNLLGLQNLPSDELLH
EFNKHVLYIIYIASGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDLLLIQSALSEKVGNYIHNMATFFGGLVIGMVNSWQIALLTLGSGPFIVAA
GAISNIFLHRLAENIQDAYAEAAGIAEQAIAYIRTLYAFSNETLAKYSYATSLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLWVGRHLISHGKANGGEIITALFSVILSGLGLNQA
ATNFYSFEQGRIAAYRLYEMISRSTSSIIQEGNILSSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKSLKLEWLRSQI
GLVTQEPALLSLSIRDNIAYGRTATLDQIEEAAKTAHAHTFISSLPKGYDTQVGRAGLAL
SEEQKIKLSVARAVLSNPSILLLDEVTGALDFEAERAVQEALDILMLGRSTIIIARRLSL
IRNADYIAVMEEGQLVEMGTHDELLHVDGLYAELLRYEEAAKLPKRTPIRSYKETATFQI
EKDSSASHSFQESTSPKMAKSPSLQRMPGVNSVRQMDTSYNSLESPKAHSPPSEQMLENG
MPSEALEKVPSIKRQDSFEMKLPALPKIDVHAVQQQASTTSDPESPISPLLTSDPKNERS
HSKTFSRPLMESDELPTEEKTPDASKTQKPPSLWRLAELSFAEWLYALLGSVGAAIFGSF
NPLLAYILAQIVAAYYRDRGHHLRYEVNKWCLVIACMGVVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDDEENSADTLSMRLANDATFVRAAFSNRLSIFIQDISAIFV
AVLIGMLLEWRLALVALATLPVLTVSAVAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIY
TVVSFCAGNKVMELYRLQLTKIFTMSFLHGMAIGFGFGFSQFLLFACNALLLYYTALTIK
KDHATLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPKIDPDDSSG
LKPPNVYGSLELKNIDFCYPTRPEVMVLSNFSLKVSGGQTVAIVGASGSGKSTIIALIER
FYDPTAGQVLLDGRDLTLFNVRWLRSHLGLVQQEPVMFSTTIKENILYARHNASEAEVKE
AARIANAHHFISSLPHGYDTPVGVVRGGVELTPGQRQRIAIARVVLKNAPILLVDEASSA
IESESSRVVQEALDTLVMGNKTTVLIAHRAAMMRHVDSIVVLNAGRIVEQGTHDLLMAAN
GLYVRLMQPHMAKRLRQHRLI
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaaggggtctatttgggtggtcaccacctcatatccagcctctaacccct
gtctcggaagtctcggaaccacccgagtcaccatctccttacctcgattcgaatgcggag
gcagttcaggtcgaagaagagggaggaatggaggaagcggaggagatggagccaccgcca
gctgctgtgcctttctctcgcctcttcgcgtttgcagatggctttgattggttgctaatg
gtggtgggatctcttgctgctgctgcccatggaactgcgctggttgtttacttgcatttc
tttggaaagattgttaatctccttgggttgcaaaacttgccctcagatgaactgttgcat
gagttcaacaagcatgttctgtacattatttacattgcttcaggcgttttcgcagctgga
tggatagaggtctcctgctggattctcactggagagaggcaaactgcagtcatcagatca
aaatatgttcaagtcttactaaaccaggacatgagttttttcgatacatatggaaacaat
ggggacattgtgagtcaagtgctgagtgatttgctgcttattcagtctgctttaagtgag
aaagtggggaactatattcataacatggcaacgttttttggtggtctggttattgggatg
gttaacagctggcaaattgctctcctgacattaggatctggtccatttattgttgctgcg
ggggcaatttctaacatatttcttcacaggctagctgagaacatacaagatgcatatgct
gaggctgctggcattgcagagcaggcaatcgcttacataaggaccttatatgcattctca
aatgagaccctggcaaaatattcatacgcgacttctctccaagcaacactgagatatggc
atattaataagccttgtacaaggccttggacttggctttacatacgggctcgcaatatgt
tcatgtgccttgcaactttgggttggaaggcatttgatttcccatggaaaagccaatggc
ggagaaattattacagctctcttttctgtaatcttaagtggccttggcctgaatcaagca
gctacaaacttctattcattcgagcaagggaggattgctgcttacagactttatgagatg
atcagccgttcaacttctagcattatccaagaggggaacatcttatcttctgtgcaaggg
aacattgagttccggaatgtgtattttagctatctctctcgtccagaaatccccatctta
agtggattttacttaactgtgcctgcaaagaaaactgtggcactggtgggcaggaatggt
tcaggaaaaagcagcataattcctctcatggagcgtttctatgaccctactttaggagag
gtccttttggatggggagaacatcaaaagccttaaattagaatggttgagaagccaaata
gggctggttacgcaagaacctgccttgcttagtttgagcatcagagataatattgcttat
ggtcgtacggctacccttgatcagattgaagaggcagcaaagacagcccatgcacataca
tttatcagctctcttcccaaaggatacgatactcaagtcggtcgagcaggtttggcattg
tctgaggagcagaagatcaaactctctgtggctagggcagttctttcaaatccctctatt
cttcttcttgatgaagttactggtgctcttgattttgaggcagaaagggcagttcaagag
gctcttgatatcctcatgttgggaagatcaactattatcattgctcggcgacttagcttg
attcggaatgctgattacatagcagtgatggaagagggtcaacttgttgaaatgggtaca
catgatgagttactgcatgttgatggcctatatgctgagcttcttagatatgaagaagct
gcgaagcttcctaaaagaacaccaataaggagctacaaggagacagcaactttccaaatt
gaaaaggactcatctgctagccacagcttccaagaatcaacttcacctaagatggccaaa
tctccgtcacttcaaaggatgcctggtgtgaattctgtgaggcagatggataccagctac
aactcactggaatcacctaaagctcatagtccaccatctgaacaaatgttggaaaatgga
atgccatcagaagcactagaaaaagtaccctccataaaaaggcaagacagctttgaaatg
aagttacctgcactaccgaaaattgatgtccatgcagtgcaacaacaagcgtcaaccacc
tccgaccctgagtcacctatttcaccacttttaacatctgatccaaaaaatgagcgctct
cactcaaagacttttagtcgacctcttatggagtctgatgagttgcccacagaagagaaa
acccctgatgcttcaaaaactcagaaacctccttcattatggaggcttgctgagctcagt
tttgctgagtggctttatgctctcctaggaagtgttggtgctgccatttttggttcattt
aatccccttcttgcttacattcttgcccagatagtggctgcatattacagggacaggggt
catcacctacgctatgaggttaataaatggtgcttggttatagcatgtatgggtgttgtc
actgtggttgccaactttttgcaacatttctactttggtataatgggggagaaaatgaca
gaaagggttaggagaatgatgttttcagcgatgctacgaaatgaggttggctggtttgat
gatgaagagaacagtgcagacactttgtccatgcgcctagcgaatgatgctacatttgtt
cgtgctgctttcagcaatcggctttctatatttatccaggatatttcagctatttttgtt
gctgttcttattggaatgctgctggagtggcggttagctcttgttgctttagcaacctta
ccagttttaacagtctctgctgttgctcagaaaatgtggcttgctggcttctcaagaggc
atacaggagatgcataggaaggcatctctggtcctcgaggatgcagtccgaaacatctac
actgtagtttctttttgtgcgggcaacaaggtcatggagctctacaggctacagttaacc
aagatattcactatgagcttccttcatggcatggccatcgggtttggttttggtttctcc
cagttcctcctctttgcatgcaatgccctcctcctctattacactgccctcaccataaaa
aaagaccatgctactctctccacagctctcaaagaatacatggtcttctcttttgcaaca
tttgcattagtcgagccatttgggcttgcaccgtacattctcaagcgtcgcaaatctctc
acatcagtctttgaaatcatagaccgagtacccaaaatcgaccctgatgacagtagtggg
ttgaaacctcccaatgtatatggaagccttgaactcaaaaacattgacttctgctaccca
acaaggcctgaagtaatggtgcttagcaacttcagcctcaaagtcagcggtggccaaact
gtagccatagtcggggcgtccgggtccgggaaaagcaccattatagccttaattgaaaga
ttttacgacccaacagcagggcaagttttattagatggtagggatctcacgctcttcaat
gtaagatggctcaggagccatttaggattggttcaacaagagccagttatgttctcaaca
accataaaagaaaacatcctttatgcccggcataatgcaagtgaagctgaagtgaaggag
gcagcgagaatagcaaatgcccaccactttataagtagcttgcctcatggttatgatacg
cctgttggggtcgtgcgtggtggggttgaattgacgccagggcaaaggcagaggattgca
attgcacgagttgtgctgaagaatgctccaatattgcttgtggacgaggcaagctcggcc
atcgagtcagagtcaagtagggttgtgcaagaggcccttgatacattggtcatgggaaac
aaaaccacggttttgattgcgcaccgtgctgcaatgatgcgacatgttgatagcatcgtg
gtcttgaatgcagggcgcattgttgagcaggggacccacgacttgcttatggcagccaat
gggttgtatgtgaggctcatgcagccacacatggccaagagattacggcaacataggctc
atctaa
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integrated database retrieval system
