Amborella trichopoda: 18434199
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Entry
18434199 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18434199 isoform X1
KO
K13144
integrator complex subunit 7
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18434199
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
18434199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
C166
Motif
Other DBs
NCBI-GeneID:
18434199
NCBI-ProteinID:
XP_006844340
UniProt:
W1PG06
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MEPTCAAKAMEWSVELEKGLRSKRRGDPIVAIQAMGPKLQKWSTEAYCTAEVSNMFGLVL
GEDRAFANSILLRLADAFKTGNNHTRACILKVFLVELKNRRKKGKLYDGILSRKRVPNYL
EMLRRVKIVFDKGGVEARALALRVLGCWADLGKDSAEMRYMILSALESHHVLEVKASLFA
AGCFCELSGDFAHVILKLLVDIVASTRRPHDVKIASVRIFASMGCSSSIARGAYEAGKKL
ILDSPNEEIVTEMLFSLSKLASRSILVLDEQVDLLVSLLGRNPFSSIHAVALRCLSFLSP
KAFWCTPFNCNIVKILINIVKNTNNLLDEALTILKKSCCYILCHMDQSEILELILVVENA
SRCHIVSKRYAALSLLVDITCNLKRMRIPFFCDSPELLSPHSIAENVALVPYGKASAPLP
WRVALLVIDQISFLVKGLDPNKATRDLSHYSSTIMNGVFYGLKQECQNLLKLLLLLVEEY
PRVGLLAIDRFRWLMEILLGMQVNPELAGSEDEIIQTCKEIPIRSLCVHEFSEFNDGKEK
FPIDSGLMACISRFLATCLDILDTVDFFDCQVVGTLQLLVGRLTKACISLPGISPFLLRS
CLIWHGQVRAQGISHLNCKISSECLTLEFAKKMIMSKELWVAYKIGVFAACQGAWFVAVF
TFQQLLDRVQLGPCHFWLKSLAQFAEAESGIQLLLFPRNDTEWLKTIEDNRTFCTTFAEV
IAQESTCNSDMFSCSDIIAMAHRAISSSGEILTGAVTLKSAFYFQRWFLSLHAKYLGILV
NIMGMLSSNIFIDETVENVVTQLEGVWEKKAQDMLTLERRFLQASDSLRRLAEELDLLKM
SFMDMNYKGFRSITYVALGCSLLAFCATFVVYFPKLPNYETSKFSRNSRGALDLVQDLAQ
RLWHEDSKISKDLEYFSTIFGEVESFTEAGVRMSSKGCKERAGLDICRFSVSGVINLQAK
AQGVKDEFDLFKVHSEGLKLMLDIIMKWIFLPSQIPFYFFQTRPCIGAEIFASNSDGGSP
NAIITIPPGFQLSLNLCLQTKNMPSKGVSRIAKIYCIIAARQSDQIIEGNEEAMAQQGLG
FCPSKTEEMLVLNKELLLYMKRDVKGSVGISEGLDNSGLVKSFVCFEPNGRGQGFSTSLL
DVSNFPEGTYRSIWHSCCIDSKGRCWSLLPLNMGPFFSIRKPPPPA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacctgtgcagccaaagccatggagtggagtgtggagctcgagaaaggcctt
cgttctaaaaggcgtggagaccccattgttgctatccaagcaatgggacctaagctccaa
aaatggagcacagaggcatattgcactgccgaagtatcaaatatgtttggtttagtcctg
ggtgaggatagggcatttgcgaactccattctacttcgacttgcagatgcattcaagact
ggaaacaatcacaccagggcctgtatattgaaagtttttcttgtagagctgaagaatcgg
agaaagaaagggaagttatacgatggtattctttcaagaaaaagggtacccaattactta
gagatgctgagaagggtaaagatagtgtttgacaaggggggtgttgaagcaagagcacta
gctttacgagtcttaggttgttgggcagatttgggaaaggacagtgctgaaatgcgctac
atgatactatcggccttggaatctcatcatgtattggaggttaaggcatcattatttgct
gctggttgcttttgtgaattatcaggtgactttgcacatgttattttgaagttacttgtg
gatatagtggcctcaacaagaagacctcatgatgtgaaaatagcgtctgtgcgtattttt
gcaagcatgggatgctcatcttcaattgcaagaggtgcttatgaggctggtaagaagttg
attttggatagtccaaatgaggaaattgtcactgagatgttattctctctctcaaaactt
gcttctaggtcaattcttgtcctggatgaacaggtggatttgttggtatccctccttggt
cggaatcctttctcttctattcatgcagtggctttgagatgtcttagcttcctctcccca
aaagcattttggtgtaccccatttaattgtaacatagtcaaaatactgataaatattgtc
aaaaatacaaataatttactcgatgaagcacttacaatattaaagaagtcgtgctgttac
attttgtgtcacatggatcaatccgagatactggaattaatattggtagtcgaaaatgct
tctcgctgtcatattgtatcgaagagatatgcagccctcagccttttggttgatataaca
tgtaatctcaaaagaatgaggataccattcttttgtgattctccagaacttttatctcct
cattctatcgcagagaatgtggctcttgtcccctatgggaaagcttcagcacccttaccg
tggcgtgttgctctgttagttattgatcagatatccttcctggtaaaagggcttgatccc
aataaagcaactagagatctctcccattattcttccactattatgaacggtgtattttat
ggattgaaacaggaatgtcagaacttgcttaagctccttttactccttgttgaagagtat
cctcgggtaggtctgttggccattgatagattcagatggttaatggaaattctattaggc
atgcaagttaatcctgagcttgcaggttctgaagatgagattattcaaacctgcaaggag
attccaataagaagtttatgcgttcatgagttcagtgaattcaatgatggaaaggaaaaa
tttcctattgattctgggcttatggcatgcattagtcggttcttggccacatgtcttgat
atacttgatacagtggatttttttgattgtcaagtagttggtacactgcaactccttgtc
ggacgcttaacgaaagcgtgcattagtttgcctggaatatccccctttctgttgcgatca
tgtcttatttggcatggtcaagtccgagcacagggcatatctcatttaaattgcaagatt
agctcggaatgcttgactttggaatttgcaaagaaaatgataatgagcaaagaattatgg
gtagcatacaaaattggtgtttttgctgcttgtcagggtgcttggtttgtggccgtgttc
acttttcagcaattgcttgatcgggtgcagttaggtccttgtcatttttggctgaaatca
ttggcacagtttgcagaggcagaaagtggaatccaattgctgctctttccaaggaatgac
actgagtggctgaagacaattgaagacaatagaacattctgcactactttcgctgaagtc
attgctcaagagtctacctgcaattctgatatgttttcttgctctgatattattgccatg
gcacatagggcaatctcttcttcaggggaaatattgacaggtgctgttacattgaagtca
gccttttattttcaaaggtggttcttgagtcttcacgcaaaatatcttggaattttagtg
aacataatggggatgttgagttccaatattttcattgatgaaactgttgaaaatgtggtg
acccagttggaaggtgtatgggaaaagaaagctcaagatatgctcactttggagcgtcga
tttcttcaggcttcagatagtttgaggaggttagcagaagagcttgatcttcttaagatg
tctttcatggatatgaactacaaaggctttagaagcataacatatgttgccttgggctgt
tcactgctagcattttgtgctacctttgttgtttactttccaaagttgcctaattatgaa
acttcaaaattttcaagaaactcgagaggggctctggacctggttcaagatctagctcaa
cgtttgtggcatgaagacagcaagattagcaaagacctcgaatacttctccacaattttt
ggggaggtggaaagtttcacagaggcaggggtacgaatgtcaagtaaaggatgtaaagaa
agggctggtctagacatttgtaggttttctgtatctggtgtcattaatttgcaagcgaaa
gctcaaggagtaaaagatgaattcgatttatttaaagtacacagtgaagggctaaagctt
atgttagacattattatgaagtggattttcttgccttctcagattccattttacttcttt
caaacaaggccctgtattggagctgagatctttgcatcaaattctgatggtggaagcccc
aatgcaataataaccattcccccaggcttccaactatctttgaacctctgcctccaaaca
aagaacatgccatccaagggtgtttctcggatagctaagatttactgcataattgcagcc
cgccagtctgatcaaataatagaaggaaatgaagaagccatggcgcaacaggggttgggg
ttttgcccttctaaaacagaggaaatgttggttcttaacaaggagttactactgtacatg
aagagagatgttaagggtagtgttgggatatctgaagggctagataatagtgggcttgtg
aaatcttttgtgtgttttgaaccaaatggaagggggcaaggtttctctacatctttgctt
gatgtttctaactttccagaaggcacatataggagtatttggcacagttgttgtattgat
agtaagggtcgttgctggagtttgctgcctcttaacatgggtccattcttcagtatcagg
aagcctcctcccccagcgtga
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