Amborella trichopoda: 18434476
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Entry
18434476 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18434476
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18434476
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18434476
Surveillance factors
Other surveillance factors
18434476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
18434476
NCBI-ProteinID:
XP_006844609
UniProt:
W1PEZ8
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MAEGKFDLPDDLILMKSPDEYFKDQLAFENSIPLSPQWLHAKPSESKASVSATPGDIRSP
SILPHGSSADPLQKDGWRLDGSQDKKEWRRTVPETESGRRDRWREEERDTGLLGRRDRRK
EGDRESEYRKTTNRTEAVSNREGSEARLIPSDRWHDTNSRSSGHETRRDSKWSSRWGPED
KDKDLRSEKRVDTEKEEVHSEKQSVLIGNRAGSERETDSRDKWRPRHRQEAHQAGSMVHR
AAPGFGGERVSNLGFAPGRGRANFNVTMQHSGSSFSTIGATPVERSDVGPGKSGLSAETF
CYPRGKLLDIYRKGKPLPAVDGFIEVPDITRTEPIDPLAFVAPDAEEEAVLEDISRGKII
GSGVYHNSSRERLVKVHQGTGDDVSIERKASTNIDDTDDSLGVASKSDALLPNGSGLVDS
YRKGVLDNQGRNENEPARLPDLTGSTKIKLDSTAVVSEYDAISNGRVLDGHLDGPQPKPN
DVGFFSGEKQVENHVFRPSIFEGMDSVSPLDIHNKLPTDSSSLFDFPSLRETQISGNNQC
REDNREDKLVERGVPPEDLSLYYRDPQGDIQGPFLGVDVISWFDQGFFDTDLPVCLADAP
EGTPFRALGDIMPQLKQKGRPVLVVDLEDKLEPSDSEVKVVGSGGPKFSDSVPGNGQYPI
SEFADPLGHGHPVTLKHEDPLENIYRKVSHADSETSMSRLNAELQSIHDFGMPDTEGLFS
RRPGSSSGPIGRPTGKLHDPMGVHFSASESLDAHASGANHLTTTNTNNLHPLGLLWSELD
GPRLRHNQPSEMMPGIDGPPHHVNPASARDPSNFNLRQGSFVDSPFVGDVPSHSSFERAR
LSHLEEESRRHEMADLLVSQQLQKQQMQQQQHAFGSPHLNMHQGGPSLDQLSTSPTFHGL
NPAFLQAQPPHHQQQADVDHFLRLQMQHQHQLQLQHQHQLHQQEQLHHQMQLQQQQHQQS
QAQQLLLEQLLQRQMHGPNFGEPSRSGALLDQVLLRQQQQQGSFLSEMQSHSQPPRHHDP
SLEQLIQAKFGNSLRRDHHHDLLELLSMAKQEERLSVERQALARHQQEQQLRARQFSRHS
SDDERHMGGLWSMDESGQFVRTVNPPQQSPFDLFQQQQRSLQQQQQQFMDSGPDSIGAHL
FEQQRQLEQNIFLHDRLQRGLYEPNVLPFERSVPPSPADPGKGIDAISTLARLQELSLQE
QRHAHMRPSVHPLIPQGVQDQFRGSKVDPLDNLPVSDPLRTEELRNGLFEKQLLQLQLQD
EMRMREYEANHYPDDSRTWRGVGNDHESKQVFMDLLHQKLGLHANHPSESMDGGGVHQVP
QERSKQSWLFSGPGSDLPFKLHTDREVLGDPISRGSGVFSMGNLVQESLTNGAGEVESSS
AGTAFGTEHLVEEESLYPAIESGDQNSFEESSMSTKLFIDPSDTKESKKSKKKASKSKGV
TKLALEQHNVAEQGAVVDRGEQTVNASFPVRSASLLATGRNAGFYDNVKGVEEAFAAPGQ
EITTDQTSSALPKTLENAGTKIPPASLSHEALSSPPSATPVKGKKPVTSHELRKDFSGVP
AISTTPENPAAATRGSFRRTSSFGDSEIMEPSFIDMLRSTKKPTQPPNETDATTNVENSD
QGHAAVKSGKKKGKKGRQIDPALLGFKVSSNRIMMGEIQRPED
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagggaagtttgatctgccagatgatctcattctcatgaaatctcctgatgag
tatttcaaagatcaactagcatttgaaaacagtattccattatcaccgcaatggttgcac
gctaagcccagtgaaagtaaggcttctgtttcagcaacacctggggacatccgttcacca
agcatattgcctcatggcagttctgcagatccattgcagaaagatggatggcgtttggat
ggatctcaagataagaaggaatggcgaaggactgtacctgagactgaaagtggtcgccgt
gatcgctggcgtgaagaggagagagacacgggcttacttggaagaagagatcgaagaaaa
gaaggcgatagggaaagcgagtaccgaaagactactaatcgcactgaagctgtatctaac
agagaaggctcagaagctaggttaatcccttctgatcgatggcatgataccaatagtcgt
agttctgggcatgaaacgcgacgtgatagcaaatggtcatcgagatggggccccgaagac
aaggacaaagatttacgaagtgagaaaagggtggatactgagaaggaagaagttcatagt
gagaaacagtcagtacttattggcaatcgtgctggttcagaacgagaaactgattctcgt
gataaatggaggccacgccatcgacaggaagctcaccaggcagggtcgatggtgcaccgt
gctgctcctggttttgggggagaaagagtttcaaatctggggtttgctcctggtcgaggg
cgggcgaacttcaatgtgaccatgcaacacagtgggtcttccttttcaactattggtgcc
acacctgtagaaaggagtgatgttgggcctggaaagagtggtttatcagctgagacgttt
tgttaccccagaggtaaactacttgacatatacaggaaagggaaacctttgcctgctgtt
gatggttttattgaagttccagacattactcggactgagccaattgatccattggctttt
gttgcacctgatgctgaagaagaggctgttctggaagatatatccagaggaaaaatcatt
ggcagtggtgtatatcataactcatctagagagagactggtgaaggtgcatcaaggtact
ggagatgatgtttccattgagagaaaggcctctactaacatcgatgacactgacgactct
ttgggagttgcttccaagtctgatgctctgcttccaaatggttctggtctcgttgatagt
tataggaagggcgtcctagacaaccaaggtagaaatgaaaatgaacctgctagattgcca
gatttgacaggttctactaaaataaaattggactccactgcagtagtttctgagtatgac
gctattagcaatgggcgagtgcttgatggtcaccttgatggtcctcaacctaaacccaat
gatgtcggctttttcagtggagaaaagcaagtggaaaatcatgtctttaggccctctatt
tttgaaggcatggattctgtgtccccacttgatatacataacaagttacccactgattcg
agctctctatttgatttcccatcacttagagagactcaaattagtggtaacaatcagtgc
cgggaggataaccgtgaagataagcttgtggagaggggagtccctcctgaggatctaagt
ctgtactatagggacccacaaggggatattcagggaccttttttgggtgttgatgtaatt
tcatggtttgatcaaggcttctttgacaccgacttgcctgtatgtcttgctgatgctcca
gaagggacaccttttagggcacttggggatatcatgcctcagctgaaacaaaaaggcagg
cctgtgcttgtggttgatcttgaggataaactggaaccttcggattctgaagtgaaagtt
gttggaagtggtggacctaaattttctgatagtgttccaggaaatggacaatatccgata
tctgaatttgctgatcctctgggtcatggccatccagtaacattgaaacacgaggatcca
ttggaaaatatctatcgaaaagtttcacatgctgattcagaaacttcaatgagtcgtctc
aatgctgagctccagagcattcatgactttggaatgccagatacggaaggtttgttctcc
agaagacccggaagcagctcaggtcccataggaagacctactggaaagcttcatgatccc
atgggcgtccatttttctgcaagtgaatcacttgatgctcatgctagtggggccaatcac
ctaactactactaatacgaataatttgcatcctctgggactattgtggtctgagctcgat
ggacctcgtctccgacataaccagccatcagagatgatgcctggtattgatggccctcct
caccatgtgaatcctgcttcggctcgagatccctccaatttcaacttgaggcagggttcc
tttgtggattccccttttgttggggatgtcccaagtcattcttcttttgagagggcacgg
ttatctcatcttgaagaagagtctcgtcgccacgaaatggcagatttgcttgtttctcag
caattgcagaagcaacagatgcaacagcaacaacatgcctttggttcccctcacctaaat
atgcaccaaggagggccctcattagatcagctatcgacctctcccactttccatggcctg
aaccctgcatttcttcaagcacaaccgccacaccatcaacaacaggcagatgttgatcat
tttctgaggctccaaatgcaacaccaacaccagcttcagctccaacatcaacaccagttg
catcaacaagaacagcttcaccatcaaatgcagctgcagcaacaacaacatcagcaatct
caagcccaacaattgcttcttgaacagttactgcagagacaaatgcacggccccaacttt
ggtgagccctcaagaagtggtgctctgctggaccaggtcttgctcaggcaacaacaacaa
caagggagttttctctcagagatgcaatcccattctcaaccaccaaggcaccatgaccct
tctcttgagcagcttatccaggcgaaatttggaaacagtcttcgacgtgatcaccaccat
gatcttttggagctcctatcgatggccaaacaagaggagaggttatctgtagagcgacag
gctcttgctaggcatcagcaagagcagcaactacgtgctcggcaattctctcgccactca
tctgatgatgaaaggcatatgggtgggctctggtccatggatgaatctgggcagtttgtg
agaactgtgaatcctcctcagcagtcaccctttgatctttttcagcaacaacagaggtct
ttgcagcaacagcaacaacaatttatggactcggggcctgattcaattggggctcatttg
tttgagcaacagaggcaactcgagcaaaacatctttcttcatgatcggctccagcgtggt
ctgtatgaacctaatgtgttgccctttgaacgatctgtccctccatctcccgctgatcct
ggaaagggcatagatgcaatcagcaccctagctcggcttcaagagctcagtctacaagag
cagaggcatgcacatatgcgcccatctgtccatcctcttattcctcaaggtgttcaggac
cagtttcgtggttcaaaggtggatcctttggacaacttgcctgtttctgatccacttcgg
actgaagagcttcgtaatgggcttttcgagaagcagctccttcagttgcagctacaagat
gaaatgagaatgagggaatatgaggccaatcattatcctgatgattcaagaacttggaga
ggagtgggcaatgatcatgagtcaaagcaagtttttatggacttgcttcatcagaagctg
ggtcttcatgctaaccatccatccgaatcgatggatggtggtggtgttcatcaagttccc
caagaaagaagcaaacaatcctggcttttctcggggcctggatctgacctcccattcaag
cttcacactgatcgagaggttttaggtgatcccatttcaagagggtctggtgtttttagc
atgggcaatcttgtacaagagagcttgacaaatggagctggggaagtggaatctagcagt
gcaggaactgcctttggcaccgaacatttggttgaagaagaatcgctctatccggcaatt
gaaagtggagatcaaaattcttttgaggagtcaagtatgagcaccaagttgttcattgac
ccttcagacacaaaagaatctaagaagagtaagaagaaggcttctaaaagcaaaggagtg
acaaaattagctctggagcagcataatgttgctgaacaaggagcagtggtagatcgaggg
gagcagactgtgaatgcttctttccctgtcagatctgcttctcttttggccactggtcga
aatgcaggtttctatgacaatgtgaaaggggtagaagaggcttttgcagcacctggtcaa
gagataaccacagatcaaacatcatcagcccttccaaaaacacttgaaaatgctggaacg
aaaatcccgccagcatcattgtctcatgaagctttgtcaagcccgccttctgcaactcct
gttaaggggaagaagcccgtcacttcacatgagttaagaaaagacttcagtggtgttcct
gcaatttcaactacaccagagaacccagcagcagctactcgagggagctttaggcgaaca
tcttcatttggtgacagtgaaatcatggagccctccttcattgatatgcttaggagcacc
aagaaaccaacacaaccaccaaatgaaactgatgcaacaaccaatgttgagaattcagat
caaggccatgcagcagtgaagagtgggaagaagaaagggaagaaagggaggcagatcgat
cccgctttattgggcttcaaggtctccagtaatcgtatcatgatgggtgagattcaacgc
cctgaggattga
DBGET
integrated database retrieval system
