Amborella trichopoda: 18434486
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Entry
18434486 CDS
T02990
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
atr
Amborella trichopoda
Pathway
atr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18434486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18434486
03036 Chromosome and associated proteins [BR:
atr03036
]
18434486
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18434486
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18434486
PBAF complex
18434486
GBAF(ncBAF) complex
18434486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
18434486
NCBI-ProteinID:
XP_006844619
UniProt:
W1PF08
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MASAAETEEVSVFKSQHLSRIEPGREADELGFFEPIHSVSDHDFLTIPNYSSWFSWDEIH
ETEKSFFKEFFDASSPSKTTKLYKEYRDFIISKYREDPTRRLTFTEVRKLLIGDVSLIHK
VYHFLETWGLINFQVSDHTKEMTINDTQVVNFEEGVPPSIRVVPAMNVTKQMTSDNATER
VVWGFEPPPLASYVDVFGEDIHREAKRRKEETAVTSLACKGCGAECSLSHYLSVKGESIL
CGKCFENVTKAEEETADGTRTTAEKQGPVSWTDSEMLLLLEGTLKHGDDWDKIAAHVRTK
SKYDCILKLIQLPFGEHLLSNVNTKGNLECPKKNASVNKENPNPFLEAIMKEEQKDEHIE
KSLHMEMNDFSVHPLKQNYLPSLTDTSFSLMSQVAFLSTIVGPQIAAAAAEVAVMALGNE
NPSGRELLDSKQENVTFACLNNDPKRVLEIEDKREMNETSRQSGTSRVPSENGVGYSILQ
LRAAIATALGATAAHAKLLADQEEREIEHLMSICIKIQLKKVQYKVSYFEEVEMKMNEEL
GFLLQKKKMILDDRILLLQKALDVGFLKGRENDPPR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcagcggagacggaggaagtctctgttttcaaatcccagcatctctctagg
attgaaccaggaagagaggcggatgaattaggatttttcgagcccatccattctgtttct
gaccatgacttcctcacaatccccaactactcgagttggttttcttgggatgaaattcat
gaaacagaaaaaagctttttcaaagaattctttgatgcaagttccccatctaagaccaca
aagctatacaaggaatacagagatttcattatcagtaaatatcgagaagacccaacaaga
agactgacattcactgaggtgaggaagttgttgattggggatgtaagcttaattcacaaa
gtttatcatttcttggaaacttggggtttaataaatttccaagtatcagatcatacaaag
gaaatgactattaatgacacacaagtagtcaattttgaggaaggagttccaccaagtatt
cgtgtagttcctgccatgaatgttacaaaacaaatgacttcagacaatgctaccgaaaga
gttgtgtgggggtttgagccaccacctttggcatcttatgttgatgtttttggtgaggac
attcatagagaggcgaagaggaggaaggaggaaacggctgttacaagtttggcttgtaaa
ggttgcggagctgaatgttcattgagccactacctttctgttaagggcgagtcgatactt
tgtggaaaatgttttgaaaatgtgacaaaagctgaggaagaaactgcagatggcaccagg
actactgctgaaaaacaaggacctgtttcttggactgattcagaaatgttgttgctctta
gagggaactttgaagcatggggatgattgggataaaattgcagcacatgttcgaaccaag
agtaaatatgactgcatcttgaagctcatacagcttccttttggcgagcacttgttaagc
aatgtaaatactaaaggcaatcttgagtgcccaaagaaaaatgcaagtgtcaataaggaa
aacccaaatccctttcttgaagctataatgaaagaggagcaaaaggatgagcacattgaa
aagagcttgcatatggaaatgaatgatttctcagttcatcctctcaagcagaactacctt
ccttcacttactgatacaagtttctcattgatgtcgcaggtagctttcctgtctacaatt
gtcggcccccagatcgcagcagctgcagctgaggttgctgttatggcattgggcaacgag
aacccatctggaagagaactcttggattcaaagcaggaaaatgtgacatttgcctgcttg
aataatgatccaaagagagttttagagattgaggacaaaagggaaatgaatgagacctct
agacagtcagggacatccagggtcccaagtgaaaatggtgttggttattcaatattgcag
ttgagagctgctattgcaacagctcttggggctaccgctgctcatgcaaagttacttgct
gatcaggaagagagagaaatagagcacttaatgtctatttgcatcaaaattcagcttaag
aaggttcagtacaaggtgagctattttgaggaggtcgagatgaaaatgaacgaggaactt
ggcttcttactacaaaagaaaaagatgattcttgatgatcgaatccttttattacagaag
gctcttgatgtaggcttcttgaaaggcagagagaacgatcccccgaggtga
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