Amborella trichopoda: 18434513
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Entry
18434513 CDS
T02990
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18434513
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
AAA_14
Motif
Other DBs
NCBI-GeneID:
18434513
NCBI-ProteinID:
XP_020522904
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MMEWSCDPNDRVAGLKIIEDLTQSAGQVQRRVLDEILRRNSETEYLKGFIQGDLGRETFK
KKVPVVNYEDVKPYIERIANGEPSQIISGQPISELLTSSGTSGGHPKMMPSTIEDLDRKT
FLYNLLVPVMNQYVDGLDQGKGMYLLFVKQEITTASGLTARPVLTSYYKSKNFRNRAFNG
YNVYTSPDETILCTDSKQSMFCQLICGLVQRDQVLRVGAVFASAFLRAIKFLEDHWEELS
SNIRTGIISEWVTDSSCREATMKILEKPKPELADLIESVCSSKSWEGIIKKLWPKTKYVD
VIVTGSMAQYISTLDFYSGSLPLVSTMYASSECYFGLNLKPLSKPSDVSYILIPNMAYFE
FIPVNKGLEEERIDRDVHCNGNTDKICMEPEPVDLVDVKVGDHYELVVTTFTGGYSSHWD
NNTQANYHHCGLYRYSVGDILLVTGFHNQAPQFKFVHRRNVVLSIDTDKTNEEDLLRAIT
KAKLLVEPLGCLVTEYTSYADTSSIPGHYVLFWELQTRGKNPLTELESSVMEDCCSNVEE
ELDSVYRRCRSKDKSIGPLEIRVVKQGTFDALMDFCVSQGSSVNQYKTPRCIKSEEALQI
LKSRVLWSFFSKKMPSWVPYRLIQH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtggagttgcgatcctaatgatcgggtagctggtttgaagatcatcgaggac
ttgacgcagagtgcaggccaagttcagagaagggtgctagacgagatcttgaggaggaac
tccgagactgagtatctgaaaggatttatacaaggtgatttagggagagagacattcaag
aagaaggtgccggttgtgaattacgaagatgtcaagccttacatcgagcgtatagccaat
ggagagccttctcagatcatttctggacaacccatctccgaattgctcacaagttcagga
acatccggaggtcatcctaagatgatgccatcaacaattgaagatttagataggaaaacc
ttcttgtataaccttttagtacctgtgatgaaccaatatgttgatggcttggaccaagga
aaaggcatgtacctcctctttgtgaagcaagaaataaccactgcgtctggtttaacggca
agaccggtcttaaccagctattacaagagcaaaaacttcagaaacagggccttcaatgga
tacaatgtatacacaagccctgatgagaccatcctttgcactgatagtaaacagagcatg
ttttgccaattgatttgtgggttagtccaaagagaccaagttctgagagttggagctgtt
tttgcttcagcttttcttcgtgccattaaattcttagaggatcactgggaagagctctct
tccaatataagaacaggcattatcagtgaatgggtcactgatagttcttgtcgagaagct
acaatgaaaatccttgaaaaaccaaagcccgaacttgctgatttaatagaatcagtttgc
agttctaaatcatgggagggtataatcaagaagttatggccaaagaccaagtacgtcgat
gttatagttacaggatccatggcacaatatatatcaaccttggatttttatagtgggagt
cttcctctggtttcgactatgtatgcctcatcagagtgctattttgggctcaacctcaag
cctttgagcaaaccatctgatgtctcgtatattcttatacccaatatggcctattttgag
tttattccagtgaataagggtcttgaggaagaaagaattgacagagatgttcactgtaat
gggaatactgataaaatttgtatggaaccagagccagtggatcttgtagatgtcaaggtt
ggcgaccattatgagcttgtggtcaccacttttacaggaggttactcatctcattgggat
aacaacacgcaagctaattatcaccattgtggcctatacagatacagtgtaggagacatc
ctcctggtgactggtttccacaaccaagctccacaattcaaatttgtacaccgaagaaac
gtggtcttaagcatcgacactgacaaaaccaatgaggaagaccttttgagagccataacc
aaagccaagctcttggttgagccattaggctgcctcgtaactgagtacacaagctatgct
gatacttcctctataccgggccattatgtactcttttgggagcttcaaaccaggggaaaa
aatccattgacagagcttgagagctctgtaatggaggattgttgctctaatgtggaagaa
gagcttgactctgtgtatagaaggtgtaggagcaaggataaatcaattgggccactggag
atcagggtagtgaaacagggtacctttgatgctcttatggacttctgtgtttctcaggga
tcatcagtgaaccagtataagacaccaaggtgtattaagtctgaggaagctctgcagatt
ctgaagtcaagagttttatggagctttttcagcaagaaaatgccgagttgggtgccttat
agactgatccagcattaa
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