Amborella trichopoda: 18434532
Help
Entry
18434532 CDS
T02990
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18434532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18434532
Spliceosome [BR:
atr03041
]
Complex C
Other components
Step II factors
18434532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
18434532
NCBI-ProteinID:
XP_006844663
UniProt:
W1PEF9
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDLLKKELERKRQSVNSDFGGRKFAKRSEIEQRKLQQLREEEQNELQSKAAIKEKSAQNP
QVSGQKPDAPPSLIPSSKSQNSDEQKIDELDLPRAEVIRRLRFLKQPITLFGEDDKARLD
RLKLLLKAGILEIDNDMTEGQTNDFLRDMAELRQRQKSGLLHSRKKRKEKDGVEDREGGG
QGDDENSGDGGSSGMEGDKDLKRMKSDFSELCDEDKILVFFKRLLNEWNQELEEMPEAEK
RTGKGKAMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRNYLAAMDQYIK
LAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTLCQRRYPS
MPSKAVEFNSLANGSDLQSLLSEEITNPSGEDRLMLMPAPKENSTHI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttgaagaaagagttggagcgcaagaggcagagcgtaaactcagactttggt
ggccgcaaatttgctaagcgatcagagatcgaacagagaaagctccaacaactccgtgaa
gaagagcagaacgagctccaatccaaagccgccattaaagagaaatctgcccaaaaccca
caagtttcaggccaaaaaccagacgccccaccttctttaatcccctcttcgaaatcccag
aactctgatgagcaaaagattgacgagctcgacctccctagggcagaggttattcgaaga
ctgagatttctcaaacaaccaataaccctttttggtgaagacgataaagcaaggcttgat
aggctgaagctccttctaaaggctggaattcttgagattgataatgatatgacagagggc
caaaccaatgattttctcagagacatggcagaactcaggcagaggcaaaagagtgggctt
ttgcattctcgtaaaaagcggaaagagaaagatggtgttgaagatcgagaaggtgggggt
caaggggacgatgagaacagcggagatggagggtcttcgggaatggagggcgataaggat
ttgaagaggatgaagagtgattttagtgagctctgtgatgaggataagatactggttttc
ttcaagaggttgttgaatgagtggaaccaggagctcgaggagatgcctgaggctgagaag
aggactgggaaggggaaggccatggtggcaacatttaagcagtgcgccagatacctgaac
ccactcttcaaattttgcagaaaaaaggttcttcctgatgacatccgtcaagctttgcta
gtagtggtggaatgttgcatgaagagaaattacttggctgccatggatcaatacatcaag
cttgccattggaaatgctccatggcccattggtgtcactatggtcggtatccacgagcgt
tcagctagagagaagatttacacaaacagcgtagctcatattatgaatgacgagacgaca
cgaaagtatttgcaatcagtgaagaggctcatgactctttgtcagcgaagatacccaagt
atgccttctaaggcagtggagttcaatagcttggcaaatggcagtgatttgcagtctctc
ttgtctgaggagatcaccaacccatctggagaggacaggctcatgctgatgccagctccg
aaagagaacagcacacatatatga
DBGET
integrated database retrieval system