Amborella trichopoda: 18434539
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Entry
18434539 CDS
T02990
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X2
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
TRCF
Cas3-like_C_2
T1R_D3-like
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
18434539
NCBI-ProteinID:
XP_006844670
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MAAIGVSLSSFSLSEGESFSLSKLKYPSSSPCKWILERETDFGRLKKRNSATMKALYTEG
VLVHKLSQSIIASKWILERKTSFQRTKKCILCKWNLVRENPLQRAKKGHPEPVKAVYTEG
VSAPGSSMAVQREKQDSESDPISILNERIQRENSNRANFRTAMDSEEAEKYIQMVKQQQQ
RGLQKLKGDREGKLEGFSYKVDPYTLKNGDYIVHKKVGIGRFAGIKYDVPKGSTQPIEYV
FIEYADGMAKLPVKQAYRLLYRYNLPNETRKPRTLSKLNDTSTWEKRRIKGKIAVQKMVV
DLMELYLHRLKQKRSPYPKNPAVSEFTSQFPYKPTPDQEQAFIDVEKDLTERETPMDRLI
CGDVGFGKTEVALRAIFCVVLAGKQSMVLAPTIVLAKQHFNVISERFSRYPEIKVGLLSR
FQTKTEKEEYIAMIKQGLLDIIVGTHALLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASF
KTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSSYSEEKVISAIEFE
LARGGQVFYVLPRIKGLEEVMEFLEQSFAGVSMAIAHGKQYSKQLEDTMEKFAQGEIKIL
LCTNIVESGLDIQNANTIIVQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPDKTVLSDD
ALERLAALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSK
VEEHRLVSIPYRTVQLDIEIRTHLSSEYIHHLDNPIKLIDGAEKAAEKDIWSLMQFTEQL
RHQYGKEPHPMEMLLKKLYVKRMAADLGISRIYTMGKIVVMTANIRKKVFRLMVESMTSD
TFRNSLVFDGNQIKAELLLELPSEQLLNWVFQCLAELHASLPALVKY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggccgccattggagtttctctatcttctttctctctgtctgaaggtgaatctttttct
ttatccaagctcaaatacccttcgtccagtccctgcaagtggattctagagagagaaact
gatttcggtagactcaagaaacggaactccgcgaccatgaaggctttgtatacagaaggg
gttttggtgcataagttatcgcagtctattattgcaagcaaatggattctagagagaaaa
acctcctttcaaagaaccaagaaatgcatcctctgcaaatggaatctagtgagagaaaac
ccccttcaaagagccaagaaagggcatcctgaacctgtaaaggctgtttacacagaaggg
gtttcagctcccggctcttcaatggcagttcaaagagagaaacaggactcagaatctgac
cccatctccattttgaacgagagaattcaacgagaaaacagcaacagagcaaattttagg
actgcaatggactcagaggaagcggagaaatacattcaaatggtgaaacaacaacaacaa
aggggcctgcaaaaattaaaaggagatagggagggtaaattagagggtttcagctacaaa
gtggatccttatactctcaaaaatggtgattatattgtgcacaaaaaggtaggaattgga
aggtttgcagggattaagtatgatgttccgaagggctcaactcagccgattgagtatgtt
ttcattgaatatgcggatggaatggcaaagctcccggtcaagcaagcttatcgattgctc
tatcgctacaatctaccaaatgaaacaagaaagccacgaacattgagcaaattaaatgac
actagtacatgggaaaagagaagaataaagggaaaaattgctgtccagaaaatggttgtt
gatttgatggagctatacctgcataggctcaaacagaaaaggtccccttaccccaaaaat
cctgcagtgtccgagtttacttctcagtttccgtacaagcctactccagatcaagaacag
gcttttattgatgtggaaaaggacttgacagagagggagactccaatggacagattgata
tgtggggatgttggattcggcaaaacggaggttgcactcagggctatattttgtgtagtc
ttggcaggaaaacagtctatggttctagcaccaactattgtcctagccaagcaacatttt
aatgtcatttcagaacgtttttctcggtatcctgagattaaagttggacttttaagtaga
tttcagaccaagacagagaaagaggagtatattgcaatgattaaacaagggcttttggat
atcattgttggaactcatgcacttcttgggaacagggttgtgtataacaatcttggtctt
cttgttgttgatgaggagcagaggtttggagtgaaacaaaaggagaagattgcttcattc
aagacttcagtggatgttctcactctttctgctacgcctatacctcgcaccctttacttg
gcattgacaggatttcgtgatgctagtttaatttcaactccacctccagaaagggtgcct
attaaaactcatctttcatcatatagtgaagaaaaggttatttcagcaattgagtttgaa
ctagctcgtgggggtcaagttttctatgttctgcctcgtattaaaggacttgaagaagtc
atggaatttcttgaacagtcatttgctggtgtttcaatggctattgctcatgggaagcaa
tattctaaacaattagaggacacgatggaaaagtttgctcagggagaaatcaagatcctt
ttatgcacaaacatagtcgaaagtggactcgacattcaaaatgccaataccataattgtt
caagatgttcaccagtttggacttgcacagctgtaccagctgcgtggaagggttggtcga
gcagataaggaagcacatgcacatttattttacccagataaaaccgtgctgtctgatgat
gcattggagagacttgcagcccttgaagagtgtcgagatcttggccaaggtttccagctg
gcagagagggacatgggaataagagggtttggaaatatttttggtgagcaacagactgga
gatgttggaaatgtcggaattgatctcttctttgagatgctttttgagagtttatcaaag
gttgaagagcatagattagtgtcaatcccttacagaactgtccagcttgacattgagata
agaactcatctttcttcggagtatatacatcacttggataacccaattaaactaattgat
ggggctgaaaaagctgctgaaaaagacatttggagtttgatgcaattcacagaacaattg
cgccatcaatatggaaaagagccacatccaatggagatgcttttgaaaaagttgtatgtg
aaacggatggctgcagatcttggtattagtagaatatataccatgggtaagattgtggtg
atgaccgccaacatcagaaagaaagtgttcaggctaatggtagagtcaatgacatcagat
acctttcgaaattcattggtctttgatggtaaccaaattaaggcagagcttcttctggag
ctacccagtgaacagctcctcaattgggttttccaatgcttagctgaacttcatgcatcg
ttacctgcactcgtgaaatactga
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