KEGG   Amborella trichopoda: 18434754
Entry
18434754          CDS       T02990                                 
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atr03009]
    18434754
Ribosome biogenesis [BR:atr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    18434754
  Pre-60S particles
   Other pre-60S particles
    18434754
SSDB
Motif
Pfam: RRP12_HEAT XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 18434754
NCBI-ProteinID: XP_006844880
UniProt: W1PHG3
LinkDB
Position
Unknown
AA seq 1181 aa
MGAHTEPSPSHDAPLSIEEEDDVCDAITRRFANSSAPQHRHLCAMAQAIRALTREEGLPL
SPLSYFASSMAAISGRARDPEAMTALSTLLASIIPSVKGLSEIRAKEAGTLLAEIAGGEG
LSTSTVRSLVKCVGLLARACDRSSWGSIGPLCKSLLSFSLDKRPKVRKSALMFVEEAFKS
FDSSSVTKKASKEVLSLFEHHRLLARDLIQSDTFRTSEKEEKHKILEVLHMLNALKLIIP
LLSGKVISKFLLELNVLLVDRFTPITRHLFDVLDAIFTSRSETFASETKHTLDSLASYIC
SIKKNPINTVITASSLLRSGLSKLNVVEPQVEISKLPQVFSSVAGKLSGPDENVSMKAAE
IVRELAGLIVNQSSFLGEVNLTTDKEALNQKESTTLKSLCSAIESVLDACAGPPNIPTLA
VVSDLFIMLAESSFIWMKAILIKLSKFEKSTDKDAPCKMQLDACIGCAVVAMGPEMILSI
TPLTLDEEKLSFSNQWLIPILKKYTIGASLRFFVEHIVPLANSLQKISHKAPKSSLVQEL
QSYTHCLWDLLPSFCNYPVDTDQSFTMLATLMLDALNQNPNIHQIIALALLKLVNQNKDI
LNAIHKANDSQSQSISFISDDFHMEVRRVKLLYTKKRASKNIKALSSFSVDLIEAFSSLL
FRSTHAENTCLKDVIGCLASITDGSKVNKIFVQSVQKFQLTDGAEDNNSSIVSITKPIHK
ESGEDVPSKRLKVLQLAYSLVGGADEDGVNMIIDHVKSALEADNELCQHEAFCVLGKLLK
EHTWFCSTRLDELIELLLGAKPSAAAQKSHFACFHHILVYLLENNLENMSTRALLILNQI
IQSLKDSNKEARKLAYDVLLQTSCSLRSCSSGDPIQRLFSMIMGCLAGTTPRVMSASVAA
LSWLIYENPSVCFSVPDLLPSVLALLQSKAREVIKAVLGFVKVLVTCLQAKDLKMPLLDI
VNGVLPWSSDSKNHFKSKVWIILEILIRKCGFGSVRSVTPDKYKETLKSIIEQRQGKTNS
KVVSIPSDSSKPINSTPERGPKRTREKDGFSRKERNGSWAPGVKEKGKTHKRFKQSNSEL
NNSSLSAHNDNQKGWRNKMTRTLKDQSQVKRQKHDRGGGKNSRGKHLNGRLDRGNHVKHR
PQKNGKHLVQAAPQFKRDNASSKVQKKSGLQKTSNPMGKES
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgggcgcccacaccgagccatcaccgagccacgacgcgccactctccatagaagaagaa
gacgacgtatgcgacgccataaccaggcgcttcgccaactcctcggcccctcagcaccgc
catttatgcgccatggcccaagccatacgtgcactaacccgagaagaaggcctccccctc
tctcccctctcctacttcgcctcttccatggccgccatctcaggccgagcacgagaccct
gaagccatgacagctctctctactctacttgcttccattataccctccgtgaagggactc
agtgaaattagggccaaggaggcggggactttgcttgcagagatagctgggggagagggg
ttgtcgacttcgactgttaggtctctggttaagtgcgttgggttgttggctagagcttgt
gatcgctcgagttggggatcaattgggcctttgtgtaagagtttgctctcgttttcactt
gataaaagacccaaggtgagaaagagtgcactaatgtttgttgaggaggcctttaaatct
tttgatagttccagtgttacaaagaaggcaagcaaagaggttttatcattgtttgagcac
caccgtctattggcaagggacctgattcaaagtgacactttccgcacttctgaaaaagag
gaaaagcacaagattttagaggtcctacatatgctgaatgctttgaaacttattatcccc
ctgctatctggaaaggtcatctcaaaatttttactggagttgaatgtcctcctggttgat
aggttcacacctattacaagacacctttttgatgttttagatgctatatttacttcaaga
tctgaaacttttgcttcagagacaaagcatactctagattccctagcatcatatatatgt
tctattaagaagaatcctatcaacactgtcataactgcatcatctttgctgagaagtggc
ttgagcaaactcaatgttgtggaaccacaagtcgagatttccaagcttcctcaggtgttc
agttcagtggcaggtaaattaagtggtccagatgagaatgtttccatgaaagcagcagag
attgttagagagttggctgggctcattgtcaatcaaagtagttttctgggagaagtgaat
ctaacaacggataaagaggccttaaatcaaaaggagtcaaccacgttaaagtctttgtgt
tctgcaatagagagtgttcttgatgcttgtgctgggccccccaatattccaaccttggca
gtcgtttcagatctatttattatgcttgcggaatcttcattcatctggatgaaagcaatc
cttatcaagctgtcaaagttcgaaaaaagcactgataaagatgcaccttgcaaaatgcag
ctggatgcatgcattggatgtgctgtcgtagctatgggtccggagatgatcctttccatc
acacctcttactctagatgaagaaaaactgtcattttccaaccaatggttgattcccatc
ttgaagaaatataccattggagcatcgttaagattttttgtggagcatatagttcccctt
gcaaattctcttcaaaaaattagtcataaagctccaaagtcatctcttgtgcaagaactg
caatcttatacccattgcctatgggatttgctaccttcattctgtaattatccagtcgat
acagaccaaagttttacaatgttggcaacgttaatgcttgatgccctcaatcagaaccca
aatattcatcagatcattgccttagctttgctgaaactggtgaaccagaacaaagatatt
cttaatgcgatccataaagcaaatgatagtcaaagtcagtccatttcattcatatcggac
gacttccacatggaagttaggagagtgaagcttttgtatacaaagaagcgtgcatcaaaa
aatatcaaggctttgtcatcattctctgtggatcttattgaggcattttctagtctactt
ttcaggtccactcatgcagaaaacacatgtttgaaggatgtgattgggtgcttggcttca
attacggatggctcaaaggtcaataagatttttgttcaatctgtacagaagtttcagctc
acagatggtgctgaagataacaatagttcaattgtttctattaccaaaccaattcataaa
gagtcaggagaagatgtaccatcaaagaggctcaaggtgcttcagctagcatactcgctt
gttggaggagctgatgaagatggtgtaaatatgataattgatcatgtcaagtctgctctc
gaggctgataatgaactttgtcaacatgaggcattctgtgttttgggcaaattattgaag
gagcatacttggttttgttcaacaaggttagatgaactgattgagcttctgcttggtgca
aagccatctgctgctgcccagaaaagtcactttgcctgtttccatcatatattggtttac
cttttagagaataatttagagaacatgagtaccagggctttattaattctcaaccagatc
atacaatctctgaaggattcgaataaagaagcaaggaaattagcttatgatgtgcttctc
cagacaagctgcagcttgaggagctgttcttctggtgacccaattcagcggttgtttagt
atgatcatgggatgtcttgctgggactactccgcgtgtaatgagcgcatcggtggctgct
ctatcatggttgatatatgagaaccctagtgtttgtttttctgtgcctgatttgcttcct
tcagttttagcattgcttcaaagcaaagccagggaagtgatcaaggcagttttggggttc
gttaaagttctagtgacatgcttacaagccaaagacctgaagatgccattgttggatatt
gtcaatggagttctgccatggtcatctgactccaaaaaccattttaagtccaaggtctgg
ataatactagaaatcctgattcgaaagtgtggttttggttctgtgaggtctgtcacacca
gataaatacaaggagacactcaaaagcattattgagcaacgtcagggaaaaacaaattcc
aaagtagtcagtattccttctgattcatcaaaaccaatcaattctactcctgaaagggga
ccgaaaagaactcgtgagaaagatgggttttcgagaaaggagagaaatggttcatgggct
cctggagtaaaagagaaaggaaaaacacacaagagatttaaacagagtaattctgaatta
aacaattctagcttgtctgctcataacgataatcagaagggttggaggaacaaaatgaca
cgaactctcaaagaccaatctcaagttaaacgacagaaacatgatcgtggaggtgggaag
aacagcagaggtaagcacttgaacgggaggctagatagaggcaaccatgtcaaacatagg
ccacaaaagaatggaaaacacctcgtacaagctgcaccccagttcaaaagggataatgca
tcttccaaggttcaaaagaaatcaggactgcagaagacgagcaatcccatggggaaagag
tcataa

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