Amborella trichopoda: 18434754
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Entry
18434754 CDS
T02990
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18434754
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
90S particles
Other 90S particles
18434754
Pre-60S particles
Other pre-60S particles
18434754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
18434754
NCBI-ProteinID:
XP_006844880
UniProt:
W1PHG3
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MGAHTEPSPSHDAPLSIEEEDDVCDAITRRFANSSAPQHRHLCAMAQAIRALTREEGLPL
SPLSYFASSMAAISGRARDPEAMTALSTLLASIIPSVKGLSEIRAKEAGTLLAEIAGGEG
LSTSTVRSLVKCVGLLARACDRSSWGSIGPLCKSLLSFSLDKRPKVRKSALMFVEEAFKS
FDSSSVTKKASKEVLSLFEHHRLLARDLIQSDTFRTSEKEEKHKILEVLHMLNALKLIIP
LLSGKVISKFLLELNVLLVDRFTPITRHLFDVLDAIFTSRSETFASETKHTLDSLASYIC
SIKKNPINTVITASSLLRSGLSKLNVVEPQVEISKLPQVFSSVAGKLSGPDENVSMKAAE
IVRELAGLIVNQSSFLGEVNLTTDKEALNQKESTTLKSLCSAIESVLDACAGPPNIPTLA
VVSDLFIMLAESSFIWMKAILIKLSKFEKSTDKDAPCKMQLDACIGCAVVAMGPEMILSI
TPLTLDEEKLSFSNQWLIPILKKYTIGASLRFFVEHIVPLANSLQKISHKAPKSSLVQEL
QSYTHCLWDLLPSFCNYPVDTDQSFTMLATLMLDALNQNPNIHQIIALALLKLVNQNKDI
LNAIHKANDSQSQSISFISDDFHMEVRRVKLLYTKKRASKNIKALSSFSVDLIEAFSSLL
FRSTHAENTCLKDVIGCLASITDGSKVNKIFVQSVQKFQLTDGAEDNNSSIVSITKPIHK
ESGEDVPSKRLKVLQLAYSLVGGADEDGVNMIIDHVKSALEADNELCQHEAFCVLGKLLK
EHTWFCSTRLDELIELLLGAKPSAAAQKSHFACFHHILVYLLENNLENMSTRALLILNQI
IQSLKDSNKEARKLAYDVLLQTSCSLRSCSSGDPIQRLFSMIMGCLAGTTPRVMSASVAA
LSWLIYENPSVCFSVPDLLPSVLALLQSKAREVIKAVLGFVKVLVTCLQAKDLKMPLLDI
VNGVLPWSSDSKNHFKSKVWIILEILIRKCGFGSVRSVTPDKYKETLKSIIEQRQGKTNS
KVVSIPSDSSKPINSTPERGPKRTREKDGFSRKERNGSWAPGVKEKGKTHKRFKQSNSEL
NNSSLSAHNDNQKGWRNKMTRTLKDQSQVKRQKHDRGGGKNSRGKHLNGRLDRGNHVKHR
PQKNGKHLVQAAPQFKRDNASSKVQKKSGLQKTSNPMGKES
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccacaccgagccatcaccgagccacgacgcgccactctccatagaagaagaa
gacgacgtatgcgacgccataaccaggcgcttcgccaactcctcggcccctcagcaccgc
catttatgcgccatggcccaagccatacgtgcactaacccgagaagaaggcctccccctc
tctcccctctcctacttcgcctcttccatggccgccatctcaggccgagcacgagaccct
gaagccatgacagctctctctactctacttgcttccattataccctccgtgaagggactc
agtgaaattagggccaaggaggcggggactttgcttgcagagatagctgggggagagggg
ttgtcgacttcgactgttaggtctctggttaagtgcgttgggttgttggctagagcttgt
gatcgctcgagttggggatcaattgggcctttgtgtaagagtttgctctcgttttcactt
gataaaagacccaaggtgagaaagagtgcactaatgtttgttgaggaggcctttaaatct
tttgatagttccagtgttacaaagaaggcaagcaaagaggttttatcattgtttgagcac
caccgtctattggcaagggacctgattcaaagtgacactttccgcacttctgaaaaagag
gaaaagcacaagattttagaggtcctacatatgctgaatgctttgaaacttattatcccc
ctgctatctggaaaggtcatctcaaaatttttactggagttgaatgtcctcctggttgat
aggttcacacctattacaagacacctttttgatgttttagatgctatatttacttcaaga
tctgaaacttttgcttcagagacaaagcatactctagattccctagcatcatatatatgt
tctattaagaagaatcctatcaacactgtcataactgcatcatctttgctgagaagtggc
ttgagcaaactcaatgttgtggaaccacaagtcgagatttccaagcttcctcaggtgttc
agttcagtggcaggtaaattaagtggtccagatgagaatgtttccatgaaagcagcagag
attgttagagagttggctgggctcattgtcaatcaaagtagttttctgggagaagtgaat
ctaacaacggataaagaggccttaaatcaaaaggagtcaaccacgttaaagtctttgtgt
tctgcaatagagagtgttcttgatgcttgtgctgggccccccaatattccaaccttggca
gtcgtttcagatctatttattatgcttgcggaatcttcattcatctggatgaaagcaatc
cttatcaagctgtcaaagttcgaaaaaagcactgataaagatgcaccttgcaaaatgcag
ctggatgcatgcattggatgtgctgtcgtagctatgggtccggagatgatcctttccatc
acacctcttactctagatgaagaaaaactgtcattttccaaccaatggttgattcccatc
ttgaagaaatataccattggagcatcgttaagattttttgtggagcatatagttcccctt
gcaaattctcttcaaaaaattagtcataaagctccaaagtcatctcttgtgcaagaactg
caatcttatacccattgcctatgggatttgctaccttcattctgtaattatccagtcgat
acagaccaaagttttacaatgttggcaacgttaatgcttgatgccctcaatcagaaccca
aatattcatcagatcattgccttagctttgctgaaactggtgaaccagaacaaagatatt
cttaatgcgatccataaagcaaatgatagtcaaagtcagtccatttcattcatatcggac
gacttccacatggaagttaggagagtgaagcttttgtatacaaagaagcgtgcatcaaaa
aatatcaaggctttgtcatcattctctgtggatcttattgaggcattttctagtctactt
ttcaggtccactcatgcagaaaacacatgtttgaaggatgtgattgggtgcttggcttca
attacggatggctcaaaggtcaataagatttttgttcaatctgtacagaagtttcagctc
acagatggtgctgaagataacaatagttcaattgtttctattaccaaaccaattcataaa
gagtcaggagaagatgtaccatcaaagaggctcaaggtgcttcagctagcatactcgctt
gttggaggagctgatgaagatggtgtaaatatgataattgatcatgtcaagtctgctctc
gaggctgataatgaactttgtcaacatgaggcattctgtgttttgggcaaattattgaag
gagcatacttggttttgttcaacaaggttagatgaactgattgagcttctgcttggtgca
aagccatctgctgctgcccagaaaagtcactttgcctgtttccatcatatattggtttac
cttttagagaataatttagagaacatgagtaccagggctttattaattctcaaccagatc
atacaatctctgaaggattcgaataaagaagcaaggaaattagcttatgatgtgcttctc
cagacaagctgcagcttgaggagctgttcttctggtgacccaattcagcggttgtttagt
atgatcatgggatgtcttgctgggactactccgcgtgtaatgagcgcatcggtggctgct
ctatcatggttgatatatgagaaccctagtgtttgtttttctgtgcctgatttgcttcct
tcagttttagcattgcttcaaagcaaagccagggaagtgatcaaggcagttttggggttc
gttaaagttctagtgacatgcttacaagccaaagacctgaagatgccattgttggatatt
gtcaatggagttctgccatggtcatctgactccaaaaaccattttaagtccaaggtctgg
ataatactagaaatcctgattcgaaagtgtggttttggttctgtgaggtctgtcacacca
gataaatacaaggagacactcaaaagcattattgagcaacgtcagggaaaaacaaattcc
aaagtagtcagtattccttctgattcatcaaaaccaatcaattctactcctgaaagggga
ccgaaaagaactcgtgagaaagatgggttttcgagaaaggagagaaatggttcatgggct
cctggagtaaaagagaaaggaaaaacacacaagagatttaaacagagtaattctgaatta
aacaattctagcttgtctgctcataacgataatcagaagggttggaggaacaaaatgaca
cgaactctcaaagaccaatctcaagttaaacgacagaaacatgatcgtggaggtgggaag
aacagcagaggtaagcacttgaacgggaggctagatagaggcaaccatgtcaaacatagg
ccacaaaagaatggaaaacacctcgtacaagctgcaccccagttcaaaagggataatgca
tcttccaaggttcaaaagaaatcaggactgcagaagacgagcaatcccatggggaaagag
tcataa
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