Amborella trichopoda: 18434768
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Entry
18434768 CDS
T02990
Name
(RefSeq) probable transcription factor GLK1 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18434768
Transcription factors [BR:
atr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
18434768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
SH3-A_UBE2O
CCDC106
Motif
Other DBs
NCBI-GeneID:
18434768
NCBI-ProteinID:
XP_011623599
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MLAVRSLASPYDKREEERCSDGDEEREVDSSFLVLENGLVFDDLFFDIDDTDILPELELD
LEMLADLSSDDHQFLSLQKQEEEDENQPSFSFQEEENHPSISLQERQNPTFSLKREDSPS
SPLQREKHTTFSLQKGEHPIPPPPSPSQPQNSSEDSSSQKTGKKSRSSSSSSEVDKSQKS
KRGAQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKY
RSHRKHLLAREAEAASWSQRRQMYWGGVNNHNIKRDFLSPLSNHNPHAWPIHSIGFPPPH
LRPLHVWGHPTVDPSHVWSKHLVPSLSPPPPPPPPPWPPHAPPPPAEAPPYWHPHNLTGT
SGPTPGTPFYPMRFPVTPVQGVPPAGVALPPAPADPLMQFDLHPSKETIDAAIGDALANP
WRPLPLGLKPPSLDSVIVELQRQGISKLPPACV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagtaagatctctggcgagtccctatgacaagagagaagaggaaaggtgcagt
gatggagatgaagagagagaagttgattcgagttttttggttttggagaatggcttggtg
tttgacgatctattcttcgacattgatgatacagatatattaccggagcttgaattggat
ctggagatgcttgcggatctctcatccgacgatcaccagtttctctccctccaaaaacaa
gaagaggaagatgaaaaccaaccatctttctctttccaagaagaagaaaaccacccatct
atctctcttcaagaacgacagaacccaactttctctctcaaaagagaagacagcccaagt
tctcctctccaaagggaaaagcacacaactttctctctccaaaaaggggagcacccaatt
ccccctccaccatcaccatcgcaaccacaaaactcatcagaggattcatcatctcaaaaa
acagggaaaaagagccggtcttcgtcatcgtcctcggaggtagataaatcacaaaaatct
aaaagaggagctcaagggaagagaaaggtgaaggtggattggacgcctgagctccacagg
cggttcgttcaggcggtggagcagctgggtgtggataaggcggtgccctcgcgaatattg
gaactgatgggcattgactgtctcactcgccacaacatcgccagtcaccttcagaaatat
cggtcacacagaaagcatctactggcaagggaagctgaggcagcaagttggagccaaagg
agacaaatgtattggggaggagttaacaatcacaacatcaagagagacttcctctctcct
ctctctaaccataacccccatgcttggccaattcattccatcggattcccacctcctcat
ctcaggcctttgcacgtgtggggacatccgaccgtcgatccatcacatgtttggtccaag
caccttgttccttcgctctctcctcctcctcctccccctcccccgccttggcctccacat
gcaccaccaccaccagccgaagccccaccctattggcacccccacaatctcaccgggacc
agcggccctaccccagggacgcctttctatcccatgaggtttccggtaacgcctgttcaa
ggagttccgcctgcgggcgtagctttaccacctgcacccgccgaccctcttatgcaattc
gaccttcacccgtcaaaagaaactatagatgctgccatcggtgatgctttagcaaatcca
tggcgtccacttcctcttggattgaagcctccatctttggacagtgttatagttgaacta
caacggcaagggatatctaagttacctccagcttgtgtttga
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