Amborella trichopoda: 18434789
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Entry
18434789 CDS
T02990
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18434789
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18434789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
Motif
Other DBs
NCBI-GeneID:
18434789
NCBI-ProteinID:
XP_006844915
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MERSRSKRHYYDQDHETSGPPINGSRRHRHHYHSNHHGHYSQSRPPPHRLPKFSQSQEPN
LPVTTCFRILCPDSKTGRVVGKNGSIIKKVSQETDALINVQSLIQGDIERVIEITDVRRR
DPDGHVPSYSPAQEALLLIHDRILDDTLEEEDGDQREQVQQYGRGGRVATRLVVLRNHVG
CILGRGGKIIEQMRFETRTQIRILPRDQHLPRCVTPDDEIVQIVGEPNDVKKALEIISSR
LKESPFRERGTLFHNRAHSPERYFAPDDDFSPQMNNIQRQTPIDGPPLGIRSSTGVTGAR
NSTYSTRPSSHVMLESFASPTVDRPQSLATEELLFRILCPSDKVESMIGEENGIMEMLRS
DVGVSIRVTDVVPGSNERIIIISSEENPEDDLIPAQEALLHIQNHIMDLGPDKDNVVTTR
LLVPVDKVVYLEGREGPSLLELKRLTRANIEILPSDELPQCAFGADEVVQIVGDICTARN
ALVQVTSRLRDALSRESSFSRMPLPPLSGQGPLGNVVGLEPESPTRNNSGREGYQGTGRL
AACYQIAQKANAAWSSKDAALFGSRTQEYEESGGHEEVLNRLDRFPKALITRTTVEVLIP
ENAIAALISRSGSKLAQISEISGASITLLDSTPGMPDRKVEISGAPEQAERAQSLLQGFV
LSTQEDVPVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatcccgttcaaaaaggcactactatgaccaggaccatgaaacgtctggtcca
cccatcaatggaagcagaagacacaggcaccattaccacagtaaccaccatggccattat
agtcaaagcaggcctccccctcaccgcttaccgaaattctctcaatctcaagaacccaac
cttccagtaacaacctgctttcgcatcctttgccctgattctaaaacagggagggtagta
ggaaaaaacgggagcataataaaaaaggttagtcaagaaacagatgcattgatcaatgta
cagtcacttattcaaggagatatagagcgtgtaatcgagatcactgacgtgcgtcgaagg
gaccctgatggtcatgtcccttcgtactcccctgcgcaagaggcattgcttttgatacat
gacaggattcttgatgatacactagaggaggaggatggtgatcagagggagcaggttcaa
caatatgggagaggagggagagtggctacaaggcttgtggtgttgcgaaatcatgtcggg
tgtatactggggagaggggggaagattatagaacagatgaggtttgagaccaggacccag
attaggatactccctagggaccagcacttacctcggtgtgtcactccggatgatgagatt
gtgcagattgttggtgaacccaatgatgtgaagaaagctctagaaattatctcttctcgc
ttgaaagagagccctttccgtgaaagaggtaccttgtttcataatagagcgcattctccg
gaacgttattttgctcctgatgatgacttctcaccccagatgaacaacatccaacggcaa
acacccatagatgggcccccattgggcattagatcatctacaggtgtgaccggtgcaaga
aacagcacctattctacaaggccctctagtcatgtgatgcttgaatcttttgcatctccc
acagttgatcgtccacagtcattggcaacagaggagcttttgttccgtatactttgtcca
agtgataaggttgaaagtatgattggagaagagaatggaataatggaaatgcttcgaagc
gatgttggagtgagtattagagttactgatgttgtaccaggatcaaatgaacggataata
atcatttcttcagaagagaatccagaagatgacctgattccagctcaggaagccttgctg
catattcagaaccacatcatggatcttggtcctgataaagataatgttgtaacaaccagg
ctgcttgttccagttgataaagttgtatatttagagggaagggagggtccgtcacttcta
gagttgaagaggttgactcgagcaaatatagagattttgccaagtgatgaacttccccaa
tgtgcattcggtgcagatgaggttgttcagattgttggggatatatgcacagctcgcaat
gcactggttcaggtgacatcaaggttacgtgatgcattatctcgtgaaagttccttttct
aggatgccattaccaccgctttctggtcaaggtcctcttgggaatgttgtaggccttgag
ccagaatctcctactagaaataattcaggtcgtgaagggtaccaaggaactggtcgcctg
gcggcatgctatcagattgcacagaaggcaaatgctgcatggtcatcaaaggacgcagca
ttatttggtagccgaactcaggaatacgaagagagtggtggtcatgaagaggtgctaaac
cggcttgataggtttccaaaagctctcatcactagaacaacagtggaagttttaataccg
gagaatgccattgctgctctcatttcaagatcagggagcaaacttgctcagattagtgag
atttcaggagcaagtattactcttcttgatagcacaccggggatgcctgataggaaagta
gagatatcaggtgccccagaacaggccgaaagagctcagagtcttcttcaaggctttgta
ctaagcacacaagaagatgttccagtaagctga
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