Amborella trichopoda: 18434819
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Entry
18434819 CDS
T02990
Name
(RefSeq) probable serine/threonine-protein kinase vps15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
atr
Amborella trichopoda
Pathway
atr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18434819
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atr01001
]
18434819
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18434819
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18434819
Protein kinases [BR:
atr01001
]
Serine/threonine kinases: Other
VPS15 family
18434819
Membrane trafficking [BR:
atr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
18434819
Autophagy
Autophagosome formation proteins
PI3K complex
18434819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
HEAT
PK_Tyr_Ser-Thr
HEAT_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
HEAT_EZ
APH
WD40_MABP1-WDR62_2nd
TCAD9
DUF7691
Tti2
Motif
Other DBs
NCBI-GeneID:
18434819
NCBI-ProteinID:
XP_011623622
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG
DPLDLKDYERRLHEIREIFRNIEHSHVWPFQYWLETDKAAYLLRQYFFSNLHDRLSTRPF
LSLIEKKWLAFQLLYAVKQSHDNGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVTPDAPLRPSMDIFSLGCVIAELFLEGQP
LFELSQLLAYRRGQYDPAPYLEKISDSGIRKMILHMIQLDSGLRLSADSYLQSNASSVFP
SYFSPLLHNFFSCLIPLDSDTRVLVTQSFYDEILKKMMHSLPSGEVLSESFKSADPKNEN
QDQKLVCLDGNSSKNDEAGKINFGNSKIQLVGDVTALFRDIEKTSHHSYAKPTFQKVPVS
ASGSDTKKNNPSLQKAEQNSKHSSIKLHPTIANDSVKKNAFPAFGKKVESNLASLMTQYD
SESDTLCVPSLSDNQNGVGCDVMVLIASLLCSCLRSVKLPQLRRAAVILLKSSQIYIDDE
DRLQHVLPFVIAMLSDPAAIVRCAALQTLCDILPLVRDFPPSDAKIFPEYILPMLSMLPD
DPEESVRICYASNISQIAITSYRYLMHSQKLGEAGVLDKLSSPRKASAPAMIESSEHMKD
KRSDAQLGQLRKTIAEVVQELVMGPKQTPNIRRALLQGIGWLCCFFGQRQSNDLLLPILP
AFLNDRDEQLRAVFYEQIVFVCFFVGQRSVEEYLLPYIEQALSDGFEAVIVNALQCLALL
CRRRFLRKRILLEMIERASPLLCYPSEWVRRSAISFVAACSECLEEVDSYVYLPPLLRPF
LRRDPSSLSSEASLSSCLTPLVSKRVFQQVIENSRNPDMLDRQRKIWYHSASYPKRDEDP
SALRSWVGKQPDQPGNRSFLTTTRHEIDNTSKSYMHNTSKSAAHTIENPVNSENLQFSGL
SAPHISGGNSVLCDGPSEGIPLYSFFVDKRPDVGPTTTSSQWGSVGVGSSSSMMSKSIIS
LASSTAPKHALGSFFNVNNGNKQVYKVVREGEGREADQASHLAGKIKDISISGMLRGASS
SSLALSDEAIGPASFARAQSVADIWRPRGVLVAHLQEHHLAVNDIAVSSDHSFFVSASDD
STVKVWDTRKLEKDISFRSRLTYPLDGSRGLCVTMVRGGPQVAVSASDGTIRVFSVDYVS
RGSGSIERYLGISDVDKRNSGEGAVSSLLDFTMDHSSGPMLLYSTRGCGVHLWDLRDNSN
AWTLQAVPEQGHISSVVTGPCGTWFVSGSSRGVLTLWDLRFLIPVNSWEYPISCPVEKMC
LLILPSGASLSSMARPLVYVAAGCNEVALWNAENGSCHEVFRLANNEGHTEMADIPWALA
RPSSKATSKLDAKRNVNPKYRVNELNEPPPRLPGIRSLLPLSGGDLLTGGTDFRIRRWDH
CSPDRSYCVCGPTTSRSTGCDEYYDTRSSFGVQVVQETSKRPSATKLTSKALLTAAATDT
AGCHRDSILSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcgcaccacgcaagtgtctgcctctgagtattaccttcatgat
ctcccctcttcttataacctggttttgaaggaggttttggggagaggtcggttcttcaag
tcaattcagtgcaagcacgatgagggcctggttctcgtcaaggtttactttaagagaggc
gacccacttgatctcaaggactatgaaagaagacttcatgagattagggaaatatttcga
aatattgagcactcacatgtttggccttttcagtattggcttgagacagataaagcggca
tatcttcttcgccaatacttctttagtaatcttcatgatcgccttagcactcgaccgttc
ctgagtttgatagagaagaaatggcttgctttccagctactttatgcagtgaagcagagc
cacgacaatggagtttgtcatggtgatattaagtgtgaaaatgttttggtgacatcttgg
aactggctctaccttgctgactttgcatccttcaagccaacctatatcccagatgatgat
ccatcagatttctcatttttctttgacactgggggaaggagacgttgttatcttgcacca
gagaggttctatgaacatggaggcgagatgcatgttactccagatgcacctttaaggcct
tctatggacatcttttctttgggatgtgtgattgctgagcttttccttgaaggtcagcca
ctgtttgagttatcccagctacttgcctatcggagaggacaatatgacccagccccatac
ctggaaaagatatcagactctggaattcgtaaaatgattcttcatatgatccagttagat
tcaggattgcgactctctgctgattcatacttgcagagcaatgcatcctctgtcttccct
agttacttttcaccgcttcttcataattttttctcctgcttgattccacttgattctgat
acgagggttttagtgacacagagcttttatgatgagatacttaagaagatgatgcacagt
ttgcccagtggggaggtactttctgaatcattcaaatccgcggatccaaagaatgaaaat
caagatcagaaactggtttgtttagatggtaactcaagcaagaatgacgaagcagggaaa
ataaactttggaaattctaagattcagttggttggtgatgtcactgccctttttcgagat
atagaaaaaactagtcatcattcttatgccaaaccaacatttcaaaaggtaccagtttct
gcctctggttctgatacaaaaaagaacaacccatctttacaaaaagcagaacaaaatagc
aagcattcatcaattaagctccatcctaccattgccaatgattctgttaagaagaatgca
ttccctgcttttgggaagaaggttgagagtaacctagcttctctgatgacccaatatgat
agtgagtctgatactctttgtgtgccatctttgtccgacaatcaaaatggggtgggctgt
gatgtcatggtactgattgcttcattgctttgttcatgtctccggagtgttaaactgcca
caattgagacgggcagctgttattcttttaaagtcttctcaaatatatattgatgatgaa
gatcgattgcagcatgtgctgccatttgtcatagcaatgctctcagacccagcagctatt
gttcggtgtgctgctctccaaactttgtgtgatatcttgcctttagtccgtgattttcct
cctagtgacgcaaagatttttccagagtatattctacctatgctctcaatgcttcctgat
gatccggaggaaagtgttcgaatttgttatgccagcaatatatcccagattgccataact
agttataggtatctaatgcattctcaaaagttgggtgaggcaggggtgctagataagcta
agttctcctcgaaaggcttctgctcctgcaatgatcgagtcatctgaacatatgaaagat
aagagaagtgatgcacaacttggacaattgaggaagactatagcagaagttgttcaagag
ctagtcatgggaccaaagcaaaccccaaacattcgaagagcactcttgcagggcattggc
tggctttgttgcttttttggtcaaaggcaaagtaatgacttacttttaccaattctccct
gcattcctcaatgatcgcgatgaacagttaagggcggttttctatgagcagattgtgttt
gtgtgcttctttgtgggtcaaagaagtgttgaggaatatcttcttccttatatcgagcag
gctttgagtgatgggtttgaagctgtgattgttaatgcattgcaatgcttggcattactt
tgcaggaggagatttttgagaaagagaattcttcttgaaatgattgagagggcttcccca
cttttatgttatccaagcgagtgggttagaaggtcggccattagttttgttgcagcatgt
agtgagtgtcttgaagaagtggactcttatgtttatctccctcctctgttgcgccctttc
ctccgaagagatccctcatcattgtcttcagaagcttctttgtcatcatgtctaacgcct
ctggtctctaaacgggtatttcaacaggttatagaaaattctagaaatcctgacatgctt
gatcggcaaaggaagatttggtaccattcagcttcctatcctaagagagatgaagatcca
agtgcgttgagaagctgggtgggtaagcaaccagaccaaccagggaaccggtcttttctt
actacaacacgacatgaaattgacaacacctcaaaaagttacatgcacaacacctcaaaa
agtgcggcccacaccatagagaatcctgtaaactctgaaaatttgcagttctcaggcttg
agtgctcctcatattagtggagggaacagtgtcctctgtgatgggccttctgaggggata
cctctgtattccttttttgtcgacaagaggcccgatgtggggcccacaaccacttcatct
caatggggatcagtaggagttggctcatcatcatccatgatgagtaaatccatcatcagc
ttggcgagttctactgccccaaaacatgctttgggctcattctttaatgtcaacaacggc
aacaaacaagtctataaagtggtgagagaaggagagggcagggaggcagaccaggcttcc
catctagctgggaaaatcaaagatataagcatttcaggcatgcttagaggtgccagctca
tcgtcacttgcattatcagatgaagcaataggccccgcctcttttgcacgagcccaatcg
gttgccgacatctggcggcctcgtggcgtccttgtggcccatctccaagagcatcacttg
gctgttaatgatattgctgtatcgagtgatcatagcttctttgtgagtgcatcagatgat
tcgactgtaaaggtatgggatacacgaaagctcgaaaaggatatctcctttaggtcgagg
ctcacttacccactagatggcagtcgtggcttgtgtgtgactatggtgcgtggtggtcca
caagttgccgtttcagcaagtgatggtaccattcgggtcttctctgttgattatgtgtct
cgaggatcggggagtattgagaggtatttgggtatctcagatgtggacaagaggaattca
ggtgaaggggctgtctcaagtctcttggatttcaccatggaccatagtagtggtcccatg
ctattatacagcactcgggggtgtggggttcatctatgggatttgagagataattccaat
gcttggaccttgcaggcggttcctgaacaaggtcatatctcttcagttgtgactgggccg
tgtgggacttggtttgtttcgggttcatctagaggggtacttactctgtgggacttgagg
tttcttatacctgtaaattcatgggaataccctatttcttgtcctgtggagaaaatgtgt
cttcttatcctcccttcgggtgcttcattgtctagtatggcaaggccattggtgtatgtt
gcggctggttgtaatgaggttgctctttggaatgcggagaatgggagctgccacgaggtg
tttcggctggcaaacaacgaaggccacaccgaaatggctgatatcccttgggctctggcc
aggccttctagcaaggccacttctaaacttgacgccaaacgcaatgtgaacccaaaatat
agagtcaacgaactgaacgaacctccccctcgtcttcctgggatccgttccttgctgcct
ttatcgggtggagacttattgacaggtgggactgacttcaggattcgccgttgggaccat
tgcagtccggatcgaagttactgtgtctgcggccccacaacaagtaggagcacaggttgt
gatgaatattatgacacgagatctagtttcggtgttcaagttgtgcaggagacgagcaag
cgcccttctgcgaccaagttgacatcaaaagctctccttactgctgctgccaccgataca
gccgggtgtcatcgagactccattctctccctagcttcagttaagttaaaccagaggctc
ttgatatcaagcagtagagatggtgctatcaaggtctggaagtag
DBGET
integrated database retrieval system
