Amborella trichopoda: 18434864
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Entry
18434864 CDS
T02990
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Pathway
atr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18434864
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18434864
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18434864
04121 Ubiquitin system [BR:
atr04121
]
18434864
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18434864
Peptidases and inhibitors [BR:
atr01002
]
Metallo peptidases
Family M67
18434864
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Others
Others
18434864
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
18434864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
18434864
NCBI-ProteinID:
XP_006844990
UniProt:
W1PHV5
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MVNEKAVFDILSSEQKVDVDNRLPLAYYYRIASHMINQAKIYREENNIIDLYIILLRFSS
LVSVTIPQHQQYPTYSGKDKLHCKKILRDFISELENLKPIVQEKFNEINKQCGGHNQKMP
HSEVYGDKKSRMPHKLHEGKHLLPNPVQEQLKKFSLGTICPSEDTLARHSYLGGLQSQQE
SLYSRANYPSSPRFKDNYRSPDGESISTQISTGDIGLASVVEVYPSTTRMPFDSPSTSVR
TGDCDINVHIVRQPYPSPVLACTQYLSHEWSTFQYASHVPIAKSRDRLPSPFGEDSSGTK
GIQNVHISTRLMEDFLELARVNTSKNLETCGVLGASLKNRTFYVTSLIIPKQESTSDSCQ
TLNEEELYAVQDEKSLFPLGWIHTHPSQSCFMSSIDLHTHYSYQIMLPEAIAIVMAPTDT
ERSYGIFRLADPEGVGVLKECQQRGFHVHEGPSDGSPIYEHCSHVYMNPNLRFEIIDLR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgaaaaagcagtttttgatatattgagctctgagcaaaaggtggacgttgat
aatcgccttcctttagcttattactacagaattgcttctcatatgattaaccaggcgaag
atttatcgggaagaaaacaacattatcgatctttacatcattctgctcagattctccagc
ttggtatcagtgactataccgcagcatcaacagtatccaacatattctggaaaagacaag
cttcactgcaagaagatattgcgagacttcatcagtgaactggaaaatttgaagcctata
gtccaagagaagttcaatgagatcaacaaacagtgtggagggcataaccaaaagatgcct
cattcagaagtgtatggtgataaaaagtcaaggatgcctcataaactacacgaagggaag
catttgctccccaatcctgtacaggagcaactaaagaagttctctttgggcactatttgt
ccatctgaggacactttggcaagacattcctatcttggcggacttcaaagccaacaagaa
tcattgtattcaagggctaattatccaagtagtcccaggttcaaagacaattatagaagc
ccagatggtgaaagtatcagcacccagataagcacaggagatattggattagcatctgtt
gtagaagtgtaccctagcacaactcgcatgccattcgattctccttcaacttctgttcgt
actggtgactgtgacataaatgtccatattgttaggcagccttatccatctccagttctt
gcttgcactcagtatctctctcatgaatggagcacttttcaatatgcttctcatgtgcct
attgctaaatcaagagatagacttccaagtccctttggtgaagattcctcggggactaag
ggcattcaaaatgtacatatttcaacaagattaatggaagactttcttgaacttgctcga
gtgaacaccagcaagaacttggaaacctgtggtgttctcggtgcttccctcaaaaatcgc
acgttctatgtaacgagcctgataattcccaagcaggagtcaacttctgattcttgccaa
actttaaacgaggaggaattatatgctgtacaggatgaaaagtctctttttcctcttggt
tggatccatacgcatccttctcaatcctgttttatgtcatccatagatttgcatactcat
tactcttatcagataatgctacctgaggcaattgcaattgtcatggctcccactgatact
gaaaggtcttatgggatatttaggctagcagatcctgagggggtaggtgtcctaaaggag
tgccagcaaagagggtttcatgttcatgaagggcctagcgatggaagcccaatttatgag
cattgctctcatgtttacatgaaccccaatctcaggtttgagattatcgatcttcgctga
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integrated database retrieval system
