Amborella trichopoda: 18434980
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Entry
18434980 CDS
T02990
Name
(RefSeq) DNA topoisomerase 3-beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
atr
Amborella trichopoda
Pathway
atr03440
Homologous recombination
atr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18434980
03460 Fanconi anemia pathway
18434980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18434980
03400 DNA repair and recombination proteins [BR:
atr03400
]
18434980
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
18434980
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Topoisomerases
18434980
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
18434980
FA (Fanconi anemia) pathway
18434980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
18434980
NCBI-ProteinID:
XP_011623691
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MDPNVLMVAEKPSIAFSIASVLSSGCMSTRRASTDVHEFDGLFQGFNVHYKVTSVIGHVF
SVDFPPAYQNWETINPLDLFQAPILKTEANPKARIARHLSQEARGCKYLVLWLDCDREGE
NICFEVIECTGIHPMDGGRRVYRARFSSVTESDIRKAMQNLVEPNKNEALAVDARQEIDL
KVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVQRYLQITTFRPEKFWSLHPY
ISKSGYELRLEWDRSRVFDLDVTKIFEKLVVDEGKVKVIGISTKEERKARPFGLNTVNLL
KVASSALGLGPHQAMQIAERLYTQGFISYPRTESTAYPATFDFRSTLAAQLDNPTWGSYV
QALLADGFSRPRTGNDAGDHPPVTPMRLATEDMLGSDAWRLYQYVTQHFIGTVSPDCKYL
RTKIDFSAGGELFYCIGLRVTSQGFTSVMPWMAVSEKHLPNFTHGELIGVSKVDLFEGCT
SPPDYLSESELISLMEKHGIGTDASIPVHINNISERNYVQVQAGRRLVPTTLGTTLIRGY
QCIDSDLCLPDIRGFIEQQITLIAKGQVDHVLVVQHAMRQFTQKFSYFVEHIADMDALFE
AQFSPLADSGRLLSKCGKCVRYMKYISVQPARLYCGACEEVYYLPQKGTVKLYKELACPL
DNFELVLFSLSGPDAKSFPLCPYCYNNPPFEGIGTLYGSLGPGRSGKGAGMPCNLCPHPT
CRHSMITQGVCACPECDGTLVLDPVSAPKWRLYCNLCNCLVSLPHGAYRIATTQERCVEC
ESTLIEIDFNKKTTPLSNGETLHRGCILCDERLHSLVEMKHGKSFFRGRGRGRGRGRGRG
RGRGRGRGGKHEDPKMSFRDF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaacgtgctcatggttgcagagaaaccaagcattgctttctccattgcctcg
gttctctcatctggctgcatgtcaactcgaagggctagcacagacgttcatgagttcgat
ggattgtttcagggattcaatgtgcattataaagtgacatctgtaatagggcatgtcttc
agtgtggattttccacctgcatatcaaaattgggaaacaatcaatccattggatcttttc
caagcaccaatattgaagacagaagccaacccaaaggctcgtattgccaggcatttgagt
caagaagcacgtggatgcaagtatttggtgttgtggctagattgtgatcgagagggagaa
aacatatgctttgaagttattgagtgtactggtattcatccgatggatggtggaagaagg
gtataccgtgctcgtttttcttctgttactgagagtgacattaggaaggccatgcagaat
cttgttgaacctaataagaatgaagcattggctgtggatgcccgtcaagagattgacttg
aaagttggagttgcttttacacgctttcaaactcgatatttccaaggaaaatatggcaac
cttgattctagtgttatctcctatgggccatgtcaaactcctactctaggtttttgtgtc
caacgctacttacagattacgacatttaggcctgagaagttttggtctttgcacccatac
atcagtaaaagtggttatgaacttcgcctagagtgggaccgtagcagagtttttgattta
gatgttacaaaaatttttgaaaagctggtggttgatgaaggaaaagtaaaagtaattgga
atatcaacaaaagaggaaagaaaagcccgtccttttgggcttaatactgtgaatttgctg
aaggttgcttccagtgcattaggccttggaccacatcaagctatgcaaattgctgagcgg
ttgtacactcagggtttcatcagctatccacgcactgagagcacagcttacccagctaca
tttgattttagaagcactcttgcagctcaacttgataatcctacatggggaagttatgta
caagctctactagctgatggttttagtagaccccgaacaggaaatgatgcaggtgaccat
cctcctgtaactccaatgcgattggcaacagaagatatgttggggagtgacgcatggaga
ttgtaccaatacgtaactcaacactttattgggactgtgagtcctgattgcaagtactta
aggacaaaaattgatttctcggctgggggggagctattctactgtatagggctacgagta
acttcccaagggtttacatctgttatgccttggatggctgtaagtgaaaaacatcttcct
aatttcacccatggggagctgataggagtttcaaaagttgacttgtttgaggggtgcacc
tcccctccagattatctgagtgagagcgagctgatatctcttatggaaaagcatggtata
ggcacagacgcatctattccagtacatattaacaacatatctgagcgcaattatgtacag
gttcaagcagggaggagattggtccccacaactctaggaaccacactaatcagaggatat
caatgtattgattcagatctctgtttgcctgatatccgcggcttcatagagcaacaaatc
accctaattgcaaagggacaagttgatcatgttcttgttgtacagcatgcaatgcgccag
tttacacaaaagttctcttattttgttgaacatattgcagacatggatgcattgtttgaa
gcacagttctctcctttggctgattctggccgtctacttagcaaatgtggaaaatgtgtc
cggtacatgaagtacatctctgtacagccagcacgtttatactgtggagcctgtgaggag
gtttattatcttcctcaaaaaggcactgtcaagctatacaaggaactagcatgcccattg
gacaactttgaactggtgctcttttctctatctggccctgatgccaagtctttcccactc
tgtccctactgctacaacaatccacctttcgaaggcattggcacactttatggctcactt
ggcccaggcaggtcaggcaaaggtgcaggcatgccctgcaacctctgcccacaccccaca
tgccgccactcaatgatcacacaaggtgtatgtgcatgcccagagtgtgatggcactctc
gtgctcgaccctgttagtgctccaaagtggaggctttactgcaacttgtgcaattgtctt
gtgtctttacctcatggtgcctatcgaattgcgaccacacaagagaggtgtgtagaatgt
gaatctaccctcattgagattgattttaacaagaagacgacacctttaagcaatggggag
acgttgcatagaggatgtattttgtgtgatgagcgtttgcattcgcttgtggagatgaag
catgggaaatcattctttaggggaagaggaagaggtagagggagaggcaggggaagggga
agggggagaggaagggggaggggcggaaagcatgaggacccaaagatgagctttcgggat
ttctga
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