Amborella trichopoda: 18435324
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Entry
18435324 CDS
T02990
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
atr
Amborella trichopoda
Pathway
atr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18435324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18435324
03029 Mitochondrial biogenesis [BR:
atr03029
]
18435324
Membrane trafficking [BR:
atr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
18435324
Mitochondrial biogenesis [BR:
atr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
18435324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
BCAS3_WD40
WD40_MABP1-WDR62_1st
Ge1_WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
18435324
NCBI-ProteinID:
XP_006845433
UniProt:
W1PGK3
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MANQSKPPHILCASFNQDSSCFSIGTRNGLKLFNSESGRLCYETVNGAYGIVEMLYSTNF
LAIVGAGEQPSLSPRRLCLFNTVTECALKELNFLTTILAVRVNRKRLIIVLQDRTYIYDS
NSLALLDTIETVANTKGLCAFSPSLDGCYIALPANTTKGSALVYNAMNLHSHCQIEAHRS
PLAAMALSSDGVYIATASEQGTIIRVHLISQAKKSYSFRRGTYPSTIYSLAFGPPKGFPH
LLVATSSSGSLHVFHLDSVTNQRNKKSVGLLASVLPNTINGALEPSHHYVFPNVLPTGVK
SCATIHTIERIASASLSRASIHVITYDGYFREYRLIIDDSHDSSWVLEHEFNMLTRPS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccaatccaagcctcctcacatcctgtgcgcgtctttcaatcaagacagcagt
tgcttttcaataggtacaagaaatggactcaagttatttaattctgagagtggaagattg
tgctatgaaacagtaaatggggcatacggtattgttgagatgttgtacagtacaaacttt
cttgccatagttggagcaggggagcagccatcattgtcaccccgtcgcctttgtctattc
aacactgtaactgaatgtgcactcaaagagctgaactttttgactacaattcttgctgtt
cgagtaaataggaaaaggcttattattgtattgcaggatagaacatacatatatgattca
aattctcttgcacttttggatacaattgaaactgttgcaaataccaaagggctttgtgct
ttctcccctagcttggatggttgctatatagctcttccagcaaatacgactaaaggatct
gcattggtatacaatgcaatgaatctccattcccattgccagatagaggctcatcgctct
ccattggctgcaatggctctttcttctgatggtgtatacatagctacagcttctgagcaa
gggaccataatcagagttcatcttatttcacaagcaaaaaagtcatatagttttcgaaga
gggacatatccatccactatctactcccttgcatttggaccaccaaagggattcccgcat
ctacttgtggctacaagctcctcaggctctctgcatgtttttcatcttgactcagttaca
aatcaaaggaataaaaaatcagttggtctgcttgcttcagtgttacctaatactattaat
ggtgcacttgaacccagtcatcattatgtatttccaaatgttctccctacaggagtcaag
agctgtgccaccatacatacgatagaaagaattgccagtgcctctctgtccagggcgtca
atacatgtaatcacatatgatggctatttcagggagtatagattgatcatcgacgattca
catgattcttcatgggtcctggagcatgaattcaacatgttaaccagaccctcatga
DBGET
integrated database retrieval system
