KEGG   Amborella trichopoda: 18435358
Entry
18435358          CDS       T02990                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
atr  Amborella trichopoda
Pathway
atr00040  Pentose and glucuronate interconversions
atr01100  Metabolic pathways
Module
atr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18435358
Enzymes [BR:atr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     18435358
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD
Other DBs
NCBI-GeneID: 18435358
NCBI-ProteinID: XP_006845467
UniProt: W1PB54
LinkDB
Position
Unknown
AA seq 383 aa
MSCVAVEASSLGVFNVMQFGAIADGTKDNTEAFGAAWKAACEWKGPSSLVIPEGTFLVGP
VLFKGPCPNASPVVVQVKGKVKASTDMSKYPSDDWIVFQYVDGLLLTGGGTFDGQGASAW
SLNQCPKKAHCKLLPTSLKFSFITNGAIRGINSVDSKLFHMLLFGCKNMEVQSIKISAPA
DSPNTDGIHIGSSSNITISRSQIGTGDDCISLGPGSTQVTVDNVFCGPGHGISVGSLGKR
PNEGDVEGLHVKNCTISDTTNGLRIKTWEDSDSSSASNFTYEDIVMNNVANPIIIDQEYC
PYASCSHKGPSRVKINNISFKNIRGTSTSKVAVNLLCSRAFPCENVKLDDIKLKYNDQGE
DSTASCTNVNGVSAGVQIPPTCL
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgtcatgtgttgctgtggaggcttcctcacttggagtgttcaatgtgatgcaatttggt
gccattgctgatggcaccaaggacaacacagaggctttcggggcggcctggaaggcggca
tgtgagtggaaagggccatcaagccttgtgatcccggagggaacatttctcgttggtcca
gtcctgttcaagggtccgtgccccaatgcctctcctgtggtggtgcaagtgaagggcaaa
gtgaaggcctccacagatatgagcaaatacccttccgatgactggatcgtgttccagtat
gtagatggcctcctgctaactgggggagggacgttcgatggccagggagcatctgcctgg
agcctcaaccagtgtcctaagaaggcccactgcaaactcctccctacgtcattgaaattc
agttttattacaaatggggctataaggggcataaattctgtggatagcaagctctttcac
atgctattgtttggctgcaagaacatggaggtccaatccatcaagatctcagcaccagct
gacagccccaacactgacggcattcatattggatcctcgtcgaacatcacgatctcgcga
tctcaaattggaacaggcgatgattgtatctcccttggtcctggtagcacccaagtaacc
gttgacaatgtgttttgtggaccaggacatggaattagtgttggtagcttgggcaagcgc
cccaacgagggcgatgtggaagggcttcacgtgaagaactgcaccatctcagacaccacc
aatggtttgaggatcaagacttgggaagattcagatagcagttctgcttccaatttcaca
tatgaggatatagtgatgaacaatgtggccaaccccatcataatagatcaagaatactgc
ccttatgcgtcttgctcacataagggtccctcacgagtgaagataaacaatataagtttc
aagaacattagaggaacctcgacttcaaaagttgcagtgaatctcttatgcagcagggca
ttcccatgtgaaaatgttaagctcgatgacatcaaattgaagtacaatgaccaaggggaa
gattcaactgcttcgtgtaccaatgtgaatggagtctctgctggagtacaaattccacca
acttgcctctag

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