Amborella trichopoda: 18435387
Help
Entry
18435387 CDS
T02990
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
atr
Amborella trichopoda
Pathway
atr00541
Biosynthesis of various nucleotide sugars
atr01100
Metabolic pathways
atr01250
Biosynthesis of nucleotide sugars
Module
atr_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
18435387
Enzymes [BR:
atr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
18435387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-GeneID:
18435387
NCBI-ProteinID:
XP_006845495
UniProt:
W1PJB3
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MAQSGQTSPGSVGYTPKNILITGAAGFIASHVANRLIRNYPNYKIVVLDKLDYCSNLKNL
LPSRSSPNFKFVKGDIASADLVNFLLITEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYG
THVLLEACKVTGQVTRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV
MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED
VAEAFEVILHRGEVGHVYNIGTKKERRVIDVAKDICKLFSLNPNEVIKFVENRPFNDQRY
FLDDQKLTNLGWSERTTWQEGLRKTMEWYTSHPDWWGDVSGALLPHPRMLMMPGIKTQFD
GSEDTNGGASHVENSSGQSHMVVPPSKGSGSSTKPSLKFLIYGRTGWIGGLLGKICEKQG
IAYDYGRGRLEERSQLLADIQNVKPTHVFNAAGVTGRPNVDWCESHKPETIRTNVVGTLN
LADVCREQGLLMVNFATGCIFEYDVEHPEGSGIGFKEEDKPNFTGSFYSQTKAMVEELLS
EYENVCTLRVRMPISSDLTNPRNFITKIANYNKVVNIPNSMTILDELLPISIEMAKKNCR
GIWNYTNPGVVSHNEILEMYRDYIDPSFKWVNFNLEEQAKVIVAPRSNNELDASKLKKEF
PELLSIKESLIKYVFEPNKRV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaagtggccaaacctcgcctggaagtgttggctacacccccaagaacatcctc
atcactggtgctgctggttttatcgcttctcatgtggccaacaggctcattaggaactac
cccaactacaaaatcgtagtccttgacaagctagactattgctccaatctcaagaacctt
ctcccttctcgatcttcacccaatttcaaatttgtcaagggagatattgctagtgctgat
cttgttaactttcttttgattactgaaaaaattgacacaattatgcactttgctgcacaa
acccatgtcgacaattcatttggaaacagtttcgagttcacaaagaacaatatctatgga
acccatgtcctcttagaagcttgcaaggtcactggtcaggttacgaggttcatccatgtt
agcactgatgaggtctatggtgaaactgatgaagatgcagttgttggtaatcatgaggcc
tctcagctcctcccaactaatccttattctgcaactaaagcaggggctgagatgttggtt
atggcctatgggagatcttatggtctccctgtgatcacaactaggggaaacaatgtctat
ggacccaaccaatttcctgagaaactcattcccaagttcatactgttggccatgaaaggg
aaaccacttccgattcatggagatggatcgaacgtgaggagttatctttactgtgaggat
gtggctgaggcttttgaggtgattttgcatagaggggaagtggggcatgtgtataatatt
gggaccaagaaggaaaggagagtgattgatgtggccaaggatatctgcaagcttttctct
ctcaaccctaatgaggtgatcaagtttgtggagaacagacccttcaatgatcagaggtac
tttttagatgatcaaaagttgacgaatttgggatggtctgagaggaccacatggcaagaa
gggcttagaaagaccatggagtggtacacgagccacccagattggtggggtgatgtgtcg
ggtgctcttttacctcacccaagaatgcttatgatgcctggtataaagacacagttcgat
ggctctgaagatactaatggtggggcttctcatgtggagaacagttctggccaaagccat
atggtggttccaccttcaaagggaagtggctcttctactaagccatctcttaagttcttg
atttatggtaggactggctggattgggggtcttttagggaagatttgtgagaaacaaggg
atagcttatgactatggaagagggcgattagaggagcgctcccaacttttagcagatatt
caaaatgtgaagccaacacatgtttttaatgcggctggggtcactggcaggcctaatgtc
gattggtgtgagtctcataagcctgagacaatacgcaccaatgtggtgggaacactaaat
ttagcagatgtttgccgagagcaggggctcttgatggtgaattttgcaactgggtgtatt
ttcgagtacgatgttgagcaccctgagggttcaggcattgggttcaaggaggaggacaag
cccaatttcactggttcgttctattcgcagaccaaggcaatggttgaagaacttctcagt
gagtacgagaatgtgtgcaccctcagagttcggatgccgatatcatctgatctgaccaat
ccacgaaacttcattaccaagattgccaattacaacaaggtggttaacattccaaacagc
atgaccatcttggatgagcttctgcctatatcaatcgaaatggcgaaaaaaaattgcagg
ggaatatggaactacacaaaccctggtgtggtaagccacaatgagatcttggaaatgtat
agggattatattgatccatccttcaagtgggtcaattttaatcttgaagagcaagccaaa
gtgatagttgctccaaggagcaacaatgaattggatgcttccaagttgaagaaagagttc
ccagagcttctctctattaaagaatccctcatcaagtatgtatttgaaccgaacaagagg
gtctga
DBGET
integrated database retrieval system
