Amborella trichopoda: 18435397
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Entry
18435397 CDS
T02990
Name
(RefSeq) WD repeat-containing protein 43 isoform X3
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
atr
Amborella trichopoda
Pathway
atr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18435397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18435397
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
18435397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Utp12
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_SPT8
PQQ_2
Beta-prop_EML
RMC1_N
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_NWD2_C
Lactonase
WD_LRWD1
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
18435397
NCBI-ProteinID:
XP_006845505
UniProt:
W1PJC5
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MGRKTASKPPGLCSFSEQGKFFAIADANGSVKIWDTRNGNLQVEWKDSNGEELSYCTCMK
WVFTKKKSQRRRLPDILSLGTRGGDVLTIDVATGKLKWKSTACHSGGVTALSFANESRAL
HSAGVDGMVCELDCKSGELLGKFKASKGSIASMSVSPNGKLLAVASKKIHLFNLENQTEV
HKFRGGDVQHLGFSEDGHSFLSSSFGDERIQVWKYDVENKTRSPAASLSMQGLPLIVEIS
NAGQDRGGLRVLSVSEKGVAYVWHGHNVSQGEFAPTMIDINSFQRKGDAEIEGMDHVFAA
KLLDPESNCHLAVCVAYGDSAKPQFRVCEVTDSQKMEEVNETLDVPNLKKKSSKKRTASD
FNSTENVDMGGLELSNEDAVQCNMNEPTMEERLASLDVHEDAKLNDHTEQLDSSNPVLPA
ADSVSVLLRQALHADDRALLLECLNTPDEKVIGNTVSMLNPSEVLKLFNSILPMFDSRGT
IIVCIIRWIRCLLLKRSSCILSQDCSVYVLNSLYQLIESRISTFKSGLQLLGTLDLLSLE
IPGEDAEAPAIIPAIYEDKDDSDGELTDAMETSKEEEVMTTRVYEESDDNIED
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaaaccgcctccaaaccacctggcctttgttctttcagtgaacagggaaag
ttctttgccattgcagacgcaaatggctctgtcaaaatatgggacacacgtaatggaaat
cttcaagtggaatggaaagactccaatggcgaagaacttagttattgcacttgtatgaaa
tgggttttcactaaaaagaagtcgcagagaagacgtttaccagacatactttcccttggc
acacgtggcggtgatgttctgaccattgatgtggccactggcaagctgaaatggaaatcc
actgcatgtcactcaggaggtgtaactgcgctttcctttgcaaatgaaagtcgtgccttg
catagcgctggtgttgatggaatggtgtgtgagttggattgtaaatcaggagaactttta
ggcaaatttaaagcttcaaaagggtctattgcttccatgtctgtttccccaaatggaaag
cttttagctgtggccagtaaaaagatacacctgttcaatctggagaatcaaactgaagtt
cacaagttccgtggtggcgatgtccagcatttgggtttttcagaagatgggcatagtttt
ttgtcatcgtcatttggtgatgagcggattcaagtatggaagtatgatgttgaaaacaaa
actagatcacctgctgcttctctatccatgcaagggctgccactaatagtggaaataagc
aatgcaggtcaggatagaggggggcttagagttctttcggtttcggagaaaggtgttgcg
tatgtgtggcatggccataatgtttctcaaggggaatttgcccccacaatgattgacata
aactcattccaaagaaaaggcgatgcagagatagaggggatggatcatgtttttgctgcc
aagttacttgatccagaaagcaattgccatttggcagtttgtgttgcttatggtgactca
gccaagccgcaatttcgtgtttgtgaggtgactgattctcaaaagatggaagaggtcaat
gaaacattggatgttccaaacctcaagaagaaatcaagtaagaagcgaacagcatctgac
ttcaacagtacagaaaatgttgatatgggtggcttggagttatctaatgaagatgctgtt
caatgtaatatgaatgagccaactatggaggaaagacttgcgagtttggatgtacatgag
gatgcgaagttgaacgaccatacagaacaattggactcttccaatccggtgcttccggct
gcagattcagttagtgttctacttaggcaagcgctgcacgctgatgatcgtgctttgtta
ttagaatgcttgaatacaccggatgaaaaggttatagggaacacagtttctatgttgaat
ccatcagaagtcctcaagcttttcaatagcatcttacctatgtttgattcacggggtacg
ataattgtctgcatcattcgatggattcgatgtttgcttcttaaacgatcaagctgcata
ctgtctcaagattgctcagtatatgttctcaattcactttaccagctcatagagtcgagg
atatctaccttcaaatcaggacttcaactattaggcaccttggaccttctgtctttagag
attcctggtgaagacgctgaagctccggcaattattcctgcaatttacgaggataaggat
gacagtgatggtgagttgactgatgcaatggaaactagtaaagaagaggaagtgatgaca
actcgtgtttatgaagaaagtgatgataatattgaagattaa
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