Amborella trichopoda: 18435580
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Entry
18435580 CDS
T02990
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18435580
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18435580
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18435580
03036 Chromosome and associated proteins [BR:
atr03036
]
18435580
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18435580
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18435580
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18435580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
HEAT_EZ
Cnd1
Htt_N-HEAT_1
CLASP_N
TPR_TNPO3_IPO13_3rd
DUF7084
Motif
Other DBs
NCBI-GeneID:
18435580
NCBI-ProteinID:
XP_011623847
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MAMVDEPLYPIAILIDELKNEDLQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLVAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETFVREKSVESLCRIGVQMKES
DQVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPEQLKAELRSIYTQLCQDDMPMVR
RAAATNLSKFAPTVEPSYLKTDIMTIFEDLTHDDQDSVRLLAVEGCAALGKLLEPLDCIA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPESTRVELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIELLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDQVFSIRDAAATNLKRLAEEFGPEWAMQHIIPQV
LEKINSTHYLQRITILHTIYLLAPVLGSEITSQSLLPVVVNTTKDRVPNVKFNAAKVLRS
LIPILDQSVVEQRVHPCLVDLYEDPDVDVRFFSGLALEVCEQVKLS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccatggttgacgagccactatatccaattgctatcttgatcgatgaactgaaaaat
gaagatcttcaactacggttgaactccatccgtaggctttcaacaattgcacgggctctt
ggagaggagagaaccagaaaggaattgatcccatttttgagtgagaacaatgatgacgat
gatgaggtactggttgcaatggcagaagagttgggggtgtttattccttatgtgggtggg
gtggagcatgctcatgttttgcttccccctttggaaacactgtgcactgtagaggaaact
tttgtgagggagaaatctgttgaatcattatgtcgaattggggttcaaatgaaggaaagc
gatcaggttgactggtttattcctctagttaagagacttgcagctggtgaatggttcaca
gcgcgtgtttcagcttgtggtttattccatattgcttacccaagtgccccagagcagttg
aaggcagagctaagatcaatatatacccaattatgtcaagatgatatgcctatggttaga
agggctgctgctacaaacttgtcaaagtttgctcctacagttgaaccaagttatctgaag
acagacatcatgacaatttttgaagatctcacacatgatgatcaagattctgtaagattg
ttagcggttgaaggttgtgctgcccttggaaagctgttggaaccactggactgcatagca
cacatcctccctgtcattgttaatttctctcaagataagtcttggcgtgttcgttacatg
gttgccaatcaattatatgagctctgtgaagcagttggcccagagtccacgagggtagaa
ttagtgccggcctatgttcggttacttcgagacaacgaggcagaagttcgcattgcagct
gcaggaaaagtaaccaaattttgtaggattttgaatccccagctcgctattcagcacatt
cttccttgtgtgaaggaactatcatcggattcctcacagcatgtccgttctgctttagct
tctgttataatgggaatggcacctattttaggaaaggatgcaaccattgagctacttctt
ccaatatttctttctcttctaaaagatgaattccctgatgttcgcttgaatatcattagc
aagcttgatcaagttaatcaggtgattggaattgatcttctttcccagtcgctcttgcca
gccattgttgaacttgcagaggatcggcattggagggttcgccttgcaataattgaatat
attcctcttttggcaagtcagttgggtgtagggttctttgatgataagcttggtgctctt
tgcatgcaatggctggaagatcaggtgttctctatacgtgatgctgctgcaactaactta
aagcgtcttgctgaagaatttggccctgaatgggccatgcagcatatcatcccacaggtt
ttggagaagataaacagcactcattatttgcagcgtattaccattcttcacactatttat
cttctagcacctgtcttgggatcagagatcacatcccaaagtctcttaccagtggttgtt
aataccacaaaagacagggtacccaatgttaagtttaatgcagcgaaggtgttgcggtct
ctcattccaattctcgaccaatctgtggtggagcaaagagtgcacccctgtttggttgat
ttgtatgaagatccagatgtggatgtgaggtttttctctggtttggctcttgaggtctgt
gaacaagtgaagctttcttaa
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