Amborella trichopoda: 18435680
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Entry
18435680 CDS
T02990
Name
(RefSeq) KH domain-containing protein HEN4 isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18435680
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18435680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
18435680
NCBI-ProteinID:
XP_006845786
UniProt:
W1PIK4
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MESGSAHPPPKRHFDPPECNGATPKRRVSSFKSPPPLKITVGETLFRILCPANKTGGVIG
KGGGIIKQFRDETGAKIRIEEPVPGCDERVILIIAPSPEHLKKHSGDEVARNEDSVEEVA
GKEEGGEAEVEISPAQKALVRVFERILQVDGEREERIEREEDLERDNGEQKVSVVPDSVV
CRLLAPGNQVGCVLGKGGKVVEKIRQESGAQIRVLSKEQLPLSAALGDELIQIIGSIASV
KKALLSVSSCLQDNPKSDASNFSSGKPLASLGHGSGSHAQPGPFASRAPSYGPGAPPFEY
LSRNHPPLSGQETVGHGLRKVQDDEVVFRLLCANDKVGSVIGRGGSIVRTLQSETGALIR
IADAVPECDERVIVVSAWENSESQRSPAQDAVIRVQTRISESLVMEKGAMVSAKLLVPSN
QVGCVLGKGGAIIAEMRRVTGTSIRIFVKDQVPKCASANDELVQVTGSLQGVQDALFHIT
SKIRDHLFPNKPQPRVGHGPPFMSSTSEIPPPPHDPYRMRPEMASSPRMYSSVGFSNNIE
RFPRPHHSMDHFENDSYLYRGERSGLGPSFDRPPSPRAWAPQPVGDSGTPRGVTDMGRPL
GPRGSGLGSGSQSAVVTSTTVEVVVPQYLMGSIFGENGSNLNQIRQISGAKVNMHDPRPG
ALEGLVVISGTPDQTHAAQSLLHAFILSGQSTP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggctctgcccatccgccacccaaacgccactttgatcccccggaatgcaac
ggcgccacccccaaacgccgcgtctcctctttcaagtcgccgccgccccttaagatcaca
gttggtgaaaccctattccgaatcctgtgccccgccaacaaaacgggcggcgttatcgga
aaaggcggcggcatcataaagcaatttcgcgatgaaactggggcgaagattaggattgaa
gaaccagttccaggttgtgatgaaagggtgattttgataattgcaccctcgccggagcac
cttaaaaagcattccggtgatgaggtcgctagaaacgaggactctgttgaggaggtggcg
gggaaagaggagggaggtgaggctgaggtcgagatttcaccggctcagaaagcactggtt
agggtttttgagaggattttgcaggtcgatggggagagagaggagaggatagagagagaa
gaggatttagagagagacaatggtgaacagaaggtttctgtggtccctgactctgttgtt
tgccggcttttggcaccgggtaatcaggtgggctgtgttcttggaaaggggggcaaagtg
gtggaaaagatcaggcaagagagtggtgctcaaattagggttttgtcgaaggagcagtta
ccactgtctgctgcactgggtgatgagttgatccagattatagggagcattgcgtctgta
aagaaagcccttctttctgtttcaagttgtctccaggataacccaaaatcggatgcatcc
aacttttcttctggtaagccattagcatcgctgggtcatggttcaggttctcatgctcaa
ccaggcccattcgcttctagggctccatcatatggtcctggagctcctcccttcgaatat
ctatcaaggaaccatcctccactatcaggacaagagactgtgggacatggccttagaaag
gttcaagatgatgaggtcgtgttccgtttattgtgtgcaaatgacaaggttggtagtgtt
attggcagaggaggctccattgtacgaactttgcagagtgagactggtgctttgatcagg
attgctgatgcagttccagaatgcgatgagcgggtcattgttgtatcagcatgggagaat
tcagaatcacagcggtctcctgcacaagatgctgttattcgtgtccaaaccaggatttca
gagtccttggttatggagaaaggtgctatggtttctgcaaagctccttgttccttcaaac
caggtcggttgtgtgctaggaaagggaggggcaatcatagctgaaatgagaagagttaca
ggaacaagtatacgtattttcgtgaaagaccaagtgccaaaatgtgcttcagcaaatgac
gaactagtccaggtcactggtagcttgcaaggagttcaggatgctttatttcatatcacg
agcaagatacgtgatcatctctttcctaataaaccacagcccagagttggtcatggccct
ccttttatgtcttctacatcagaaattccacctccaccccatgatccatatagaatgaga
cctgagatggcctcttctccaagaatgtattcgtcagttgggttctccaataacatcgaa
cgattccctcgtcctcatcatagtatggatcactttgaaaatgattcatatttatatcgt
ggtgagaggtcaggattgggtccctcttttgatcgtcctccttctccaagggcatgggct
cctcagccagtaggggacagtggaactcctagaggcgtgacagatatgggaaggcctctt
ggtccaagaggttcaggcttaggaagtggaagccaatctgctgtcgtaacaagtaccact
gtagaagttgtagtccctcaatatttgatggggtcaatttttggagagaatggaagcaat
ctaaatcaaatcagacagatatcaggcgccaaggtgaacatgcatgatccaagacctggt
gccttggaaggattggtagtcatatcaggaacccctgatcaaactcatgctgcacagagc
cttctccatgctttcattcttagtggacagtcaacaccatga
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