Amborella trichopoda: 18436115
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Entry
18436115 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC18436115
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18436115
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
18436115
Ribosome biogenesis [BR:
atr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
18436115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
DUF3915
PaREP1
Motif
Other DBs
NCBI-GeneID:
18436115
NCBI-ProteinID:
XP_011624102
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAMLQSLCMAPMAFRYRISHGLNVLPVRLGPRRQWRSVFSCHACLSSMSSESRHILLGMA
EKELQQLALEFGQQSYRGKQIHSLLYKRKAKDIQDFSHIPQAFRDSLKEAGWKVGRSPIH
QVVTAADGTIKALIKLEDSRLVETVGIPVEDDDGSYRLTACVSSQVGCPLRCAFCATGQG
GYSRNLQPREIVEQVLTIEELFKRRVTNVVFMGMGEPMLNLTSVLEAHRCLNKDIQIAQR
MITISTVGVPNTIQKLASHKLQSTLAVRYAHNAPYNWVCRREGGRACVCVCVCVCVCVCV
RERERERERERERDRXLVAEINDSVEHAIELAELLHRWGSGYHVNIIPFNPIEGSQFRRP
YKKPILAFVAALESRKITASVRQTRGLDASAACGQLRNEHQKDPLSVLR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctatgttgcagagcttgtgcatggctcccatggcgtttaggtatagaattagccat
ggcctgaacgttttgcccgtcagattggggccaaggcgtcaatggcgttctgttttcagt
tgccatgcttgcctttcctctatgtcctctgaatctcgccatatccttcttggaatggct
gagaaggagcttcagcaactcgctcttgaatttggacagcaaagctatcggggaaagcaa
atccacagtctgctttacaagagaaaggccaaggacatccaggatttcagtcacattcct
caagcttttagagactctctcaaagaagcaggctggaaggttggtcgctctcctattcat
caagtcgttactgcagcagatggaaccatcaaggcgttgataaagctggaagatagcaga
ctcgttgaaactgttggcataccagttgaagatgatgatggtagttaccggcttactgct
tgtgtctcatcacaggtagggtgcccattgcgctgtgcattttgtgccactggccaggga
ggatactcaaggaaccttcagcctcgtgaaattgttgagcaggtcttgaccatagaggag
ctctttaagcgtagggtgacaaatgttgtgttcatgggaatgggagaaccaatgttgaac
ttgacgtccgttttggaagctcatcgatgtttgaacaaggatattcaaattgcgcaaagg
atgattacaatttccacagtgggtgttccaaacacaatacagaaattagcttcacacaaa
cttcaatccactttggcagtgaggtatgcccataacgctccttacaattgggtgtgtagg
cgggagggcgggcgcgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
agagagagagagagagagagagagagagagagagagagagacaggtagttggtagctgaa
ataaatgatagtgtggagcatgctatagaacttgcagagctgcttcacagatggggcagt
ggctatcatgtgaatattatacctttcaatcccatcgaaggatcacaatttcggcggcca
tacaagaaaccaatacttgcatttgtggcggctcttgaatcccgtaaaataactgcgagt
gtgcggcaaacacgtgggttggatgccagtgctgcctgtgggcagctgcgaaatgagcac
caaaaggaccccctttctgtcttgagataa
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