Amborella trichopoda: 18436169
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Entry
18436169 CDS
T02990
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
atr
Amborella trichopoda
Pathway
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18436169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18436169
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
18436169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
18436169
NCBI-ProteinID:
XP_006846255
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MFFEGYGFHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR
NPATERVSHCGVLEFIAEEGMIYVPYWMMENMLLQEGDAVKVKNATLPKGEYVKLQPHTM
DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVD
FAAPLDYKEPEKPVPSSIPSSSKAPAQVEEEPATEEPKFNPFTGVGRRLDGKPLKYSEAP
NPSNNAKEKASAITSSKQQPTVPTSSSGASRQPSGKLVFGANSSHAPKESPKVAAKTAPT
EPPKKEEPKFQAFSGKKYSLKD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgaaggctatggcttccatggcacatcatttgaacagacttatcgttgctac
cctgcatcttttattgataagccacagttagaaagtggtgacaaaattatcatgcctccc
tctgcccttgaccgccttgcatctctgcatattgactatcccatgttgtttgagcttcgt
aatcctgctactgagcgggtttctcattgtggtgttctagagttcattgctgaagaaggc
atgatatatgtgccatattggatgatggaaaacatgctcttacaagagggggatgctgtg
aaagtgaaaaatgcaacccttccaaagggcgaatatgtgaaattgcaacctcatacaatg
gactttttagatatctcaaacccaaaagccatcttggagacaacattgcggaacttctcc
tgtttgaccactggtgacagcattatggttgcctataataataagaagtattacattgac
attgtggaaacaaagccgtcttctgctattagtatcatcgagacagattgtgaggtggac
tttgctgctcctcttgattacaaggagcctgaaaaaccggtgccttcaagcatcccttca
tcaagcaaagcacctgctcaagttgaggaagaacctgcaacggaagaacccaagttcaac
ccatttaccggtgttggacggcggttggatgggaagccattaaagtattcagaggcaccc
aatccttccaacaatgccaaggagaaggcatccgcaattacaagcagtaagcagcaacca
actgtgcccacttcatctagtggtgcatctcgccagccttcgggaaagctagtatttggt
gcaaattcaagtcatgctccaaaagaatctccaaaggttgctgcaaaaactgctccgaca
gagcctccaaagaaggaagaaccaaaattccaagcattttcagggaagaaatactcattg
aaggactga
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