Amborella trichopoda: 18436411
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Entry
18436411 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18436411
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
18436411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
ANIS5_cation-bd
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
18436411
NCBI-ProteinID:
XP_020524254
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MGTAKGKHRLDKFYHFAKEQGYRSRAAYKIMQLNSKFNILPSARSLLDLCAAPGGWMQVA
VKHMPVGSFVLGVDLVHIRPIQGAVSIQGDITTQDCRSAIRKTLGENGCGAFDVILHDGS
PNVGGAWAKEATSQAALVVDAVRLASEFLVPKGTFVTKVFRSQDYNAVLYCLKQLFEKVE
VTKPSASRSTSAEIYVVGLRYKAPAKIDPRLLDVKHLFQGAIEPPKVMDVLRGTKQKRNR
EGYEDGASILRKVCLASEFVWSEMPLDLLGSVTCIAFEDPACLTIKEHSLTTEEIKALCD
DLLILGKQDFKQLLKXRMHIRKALSGEQKVASPKASDEEDGMTTQENDDEHILNEMEELT
YVLDSKKKRAKKLLAKRRAKEKSRTKIGMQIDAMEDGYIDNELFSLSSIKGKKDLQAVDS
TEFDYINGDNVESESEETGVCEGEEDSPGDIDSDEEHRRYDEQLEEFLDQAYERFVTGKE
RSSKQRKRARLDLADGSGELWKASFHTRDTKVGGQDLAGDSDVDQDMEANPLVVPLHEEL
PLTKEQLTEQWFSQDVFASTEPEEAATKYGSENEVEVVIQDAPTPSISKKLGPNKLDSLS
QIYVSQQDDFEIVPAEGSSSSDDSSSDGDESEYDTDSKAEILAYAKKMLRXKQREQILAD
AYNRYTFDDQEDLPIWFLEDEKRHNKPLKPITREEVEAMRAQFREIDARPAKKVAQAKAR
KKRVAMRKLESVKRKANSISDQTDISERSKMKMIDKLYKKATPKRPNKEYQVAKKGVHVK
PGKGKVLVDPRMKKDMRTHGVGKPGKAGKKKGKGAKVRGKGGKGKSKGFGGLADKKGKKM
GRKR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagcaaagggcaaacatcgcctcgataaattctaccattttgccaaagaacaa
ggctacaggtcaagagcagcctacaagattatgcaactgaactccaaatttaacattttg
ccctcagctaggtcgctcttggacctctgtgccgccccgggtgggtggatgcaagttgcg
gtgaagcacatgcccgttggcagctttgtgctgggggtggaccttgtgcatataaggccg
atccaaggggcggtttccatacagggtgatatcacgactcaggactgtaggtcagcgatt
aggaagacgttgggggagaatgggtgtggggcatttgatgtaattttgcacgatgggtcc
ccaaatgttggaggggcatgggcaaaggaggcgaccagtcaggctgcattggtggtggat
gcggttcggcttgcgtcggaattccttgtgcccaaggggacctttgtcactaaggtattc
aggtcacaagattacaatgcagtactttattgtctaaagcagttgtttgagaaagttgag
gtgaccaaaccctcggcaagtcgttcaacttctgctgaaatttatgttgtggggcttaga
tataaagcccctgcaaagattgatccacggcttcttgatgttaaacatctatttcaaggg
gccatagaacccccaaaggtgatggatgttcttagaggaaccaagcaaaaaagaaatcgg
gagggctatgaggatggagcttcaatcttgcgaaaggtgtgtttggcgtctgaatttgta
tggtcagagatgcctttggatcttcttggatcagttacatgcatagctttcgaggatcct
gcttgtttgaccatcaaagaacattctttaacaacagaagaaatcaaagcactctgtgat
gatttgctcattctgggaaaacaagattttaagcagctactgaagtgacgcatgcacata
agaaaggccttgtcaggtgaacagaaagttgcttctcctaaggcttctgatgaagaagat
gggatgactactcaggaaaatgatgatgagcacatacttaacgaaatggaggaattgact
tatgttttggacagcaagaagaaaagagcaaagaaactccttgcaaaacgacgggctaag
gaaaaatctcgtacaaagataggaatgcaaatagatgcaatggaagatggttacattgac
aatgagttgttttctctgtcctccatcaaggggaaaaaagatctgcaagctgttgattca
actgagtttgactatataaatggtgacaatgtggaaagtgagagtgaagaaactggtgta
tgtgaaggtgaggaggattctcctggtgacattgattctgatgaagaacaccgaaggtat
gatgaacaacttgaggagtttctggatcaagcttatgaaaggtttgtgactggaaaggaa
agaagttccaagcagcgcaaacgtgcgaggctggatttagcagatggaagtggtgagcta
tggaaggcatcatttcacaccagagataccaaggttggtggtcaagacttggcgggtgat
tccgatgtagaccaagatatggaagcaaatcctttagtagtaccactccatgaggagctg
ccgctcaccaaagagcaactcactgaacaatggttcagtcaggatgtgtttgcatcaaca
gaaccagaagaggcagcaaccaaatatggtagtgaaaatgaagtggaagttgtcatccaa
gatgcccccacaccttctatctcgaaaaagttggggccaaataagctcgattccttaagt
cagatttatgtatcccaacaagatgactttgaaattgtccctgctgagggctcctcatca
agtgatgattcatcttctgatggtgatgaatcagagtatgacactgactcaaaggctgaa
atcttggcctatgcaaagaagatgttgaggtagaagcaaagggagcagatacttgctgat
gcttataacaggtatacatttgacgaccaggaggatttgccaatttggtttttggaggat
gaaaagaggcacaacaagccattaaagcccatcactcgagaagaggtagaagccatgagg
gcccaatttagggagatagatgctcggccagccaagaaggtggctcaagccaaggctagg
aagaagagagtggccatgaggaagcttgagtctgtgaagagaaaggcaaactctatttca
gatcagacagatatttccgagagatcaaagatgaagatgattgacaagctttacaagaag
gcaacacctaaaaggccaaataaagagtaccaggtagcaaagaagggggttcatgtgaag
cccggaaaaggtaaagtgttggtggatcctcgaatgaagaaagacatgaggactcatggg
gtggggaagcctggaaaagctggtaaaaagaagggaaagggagcaaaggtgaggggaaag
ggaggcaaaggtaaaagcaaagggtttgggggattggctgataagaaagggaagaagatg
ggaaggaagagatga
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