Amborella trichopoda: 18436442
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Entry
18436442 CDS
T02990
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
atr
Amborella trichopoda
Pathway
atr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18436442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18436442
03029 Mitochondrial biogenesis [BR:
atr03029
]
18436442
Membrane trafficking [BR:
atr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
18436442
Atg1 complex
18436442
Mitochondrial biogenesis [BR:
atr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
18436442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
18436442
NCBI-ProteinID:
XP_011624205
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MASPSSSHFESARTEQIISEFFLKGLHVILESRVPFLCSETHRTEQGGLSSSSVSRVRKK
DKWFMLAIGECSAASEILNVWHKNAMDPLVIDVVLVQEDSSKAQGSDKEIGSPMKLHSFS
DTFTSAQSTSYWNVGEEHFNSSSKETSVKVLERWVMQYESLKSSTRDHLSSKGRGSLGFG
ETVSHSSDDPTASTRMYKRLILLLRSLYVTSRLLPAYKLFRKLNSSNQSYNFGISYRVSS
FVEPFSRMEEREMTNFRFTPVDTAFGRLSLSVSYCTVLPHLNIEDSTSLLPPIIVDYVGS
PAADPLKRFPCGSLPKSVDKGYQATSFPSQGIRSSYSSPFQRPHSWSSGLSRCGPPTYSP
SPPLYPNYSIPYSTLSDSHASTSNVHGHRVPPCGHHNHDQSAPISYRPSSQKKGTSSEEL
WLTPPFSPSSSPSPTNSPSCNPLLNRPRFGSSPVSIPLGRNPGCVSPNNSDPNKLLLPPP
SPKSKRPDYSNRDDSSRGHATHVSGSQESPSPSRGNSFRKNDALKSGETYIGSTSLQTNL
GQKVFRDSREDSGRFSGLISSSSSPRFGFSRSSSRLSLQDDLDDYEFTCPFAVDDVDTID
SHTRNDPSDGKDAPDATLMFHSTRKSQDAAVGALVHMLRTAPPLRQDSSYFSHSSRTDSG
TGTFSGTGGGSSFFTSRKTSEALDELQTYREMKNLLLAQSRTQSVTLEPLEATDEVA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccaagttcttcccattttgaatcagccaggaccgagcagatcatttctgaa
tttttcttgaagggcttgcatgtcatattagagtcaagggtacctttcttatgttcggaa
acccacaggacggagcaaggtgggttatcatcgtcatctgtatcccgtgttagaaagaaa
gataagtggttcatgttagctataggggaatgttctgcagcttcagagattcttaatgta
tggcataagaatgccatggatcccttggtgattgatgtggttcttgtgcaagaagacagt
tccaaggctcaaggttctgacaaagaaattgggtcccctatgaaactacattcctttagc
gatacattcacaagtgcccaatcgacaagctactggaatgttggtgaggaacacttcaac
tcatcatccaaagaaacctcagtaaaggttttagagagatgggtaatgcaatacgagtcc
ctaaagtcaagcacaagagaccacctttctagtaaaggccgtggaagtttgggatttggg
gagacagtttctcattccagtgatgatcctactgcttctactaggatgtataaaagattg
atcttgctcttacgctccctctatgtaacctcaagactcttgccagcttataaactcttc
cgaaagcttaattcatcgaaccagagctacaactttggtattagttaccgtgtttcatca
tttgtggaacctttctctcgcatggaagaaagggagatgacaaatttcaggtttacacct
gtggatacagcctttggcaggctttctttatccgtttcatattgcactgttttaccacat
ttaaacattgaggactctacatcactattgccacctattatagtagactatgttggaagt
ccagctgctgaccctctaaagagatttccgtgtgggtcacttcctaaatctgttgataag
gggtatcaggccacttcctttccttctcaagggattagatcatcatactcttcaccattt
caacgtccacatagctggagtagtggtctttctcggtgtggtcctcctacatactcgcct
tctcccccattgtatcctaattattcaattccttattctaccttatcagattctcatgct
tcaacatccaatgtccatggccatcgtgttcctccttgtggccaccataaccacgatcaa
tctgccccaattagttatagaccttcatctcaaaagaaaggtacaagttctgaggagttg
tggctaacacctccattctcaccatcatcttctccttcaccaacaaattcaccgagttgc
aaccccttgcttaatcgccctcgttttgggagttctcctgtgagtataccattaggtagg
aatcctggatgtgtctcacctaataactctgacccaaacaaacttttacttcctcctcca
tcacctaaaagtaagaggccggattactcaaatcgtgatgatagttctcgaggccatgct
actcatgtttctggttctcaagaatccccatccccatctagaggtaattctttcaggaag
aatgatgccttaaaatctggagaaacgtacataggcagtaccagcctgcaaacaaacttg
ggccaaaaggttttcagagatagtagggaggactctggaagattttcggggttgatctct
tctagtagctcgccacggtttgggttttcaagaagctcaagtagattgtctctccaagat
gaccttgatgattatgagtttacctgtccatttgctgtagatgatgtggatacaattgac
tctcacactaggaatgacccctctgacgggaaggatgctcccgatgctactctcatgttt
cattccacgcgcaagtcacaagatgcggccgtcggagcccttgtccacatgctccggact
gcaccacctctccgccaagactcctcttacttctctcattcttcgagaactgactctggc
actgggactttcagtgggactggcgggggctcgagcttctttacctcgagaaagacttca
gaggctttagatgagcttcaaacctatagagagatgaaaaatcttttgctggctcagagc
cgaacccagtcggtgaccttggaacccctcgaagcaacagatgaagtagcttga
DBGET
integrated database retrieval system
