Amborella trichopoda: 18436476
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Entry
18436476 CDS
T02990
Name
(RefSeq) mRNA-capping enzyme isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18436476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18436476
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
18436476
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
18436476
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
18436476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Tc-R-P
PTP-SAK
PTP-NADK
Y_phosphatase
Y_phosphatase3
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
18436476
NCBI-ProteinID:
XP_006846558
UniProt:
W1PJQ3
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MDLNASPVPEDDEEEHIFEEQAEEDTVDGHVETAVEILRREREERRQRRKRENQSEEPKR
PAQIPKYNPVPQQRNPRSHDRAQQLPTGWLDCPNSGKRIVAIIPSKVPLGESFNDFIAPG
RRYSWKQVLRQQKVLGNEICMVIDLTNTARYYDPSDWKKQGIKYCKIACKGRDAVPDNVS
VNCFVHEVLQFMERHKGSNRKCALVHCTHGYNRTGFMIVNYLVRSHGYSVTDALDVFADA
RPPGIYKPDYIDALFSFYHERRPKILTCPPTPEWKRPSELDLNGEAVSDREDDGVKIVEM
ENTVMTNDDVLGDEIPTDQQVLLQKICFTKLELGGANLHFPGSQPVSLDRSNLQLLRQRY
YYATWKADGTRYMMLITLDGCYLIDRKFCFRRVQLRFPRRSSNQGPSDKTHHLTLLDGEM
IIDTVPETGEQKRRYLVYDMMLLNGVSVTKLPFCERWKLIEKEVVEPRNSDVSNNHSYRY
DMEPFRVRRKDFWMLSAVIKVLRDFIPKLSHEADGLIFQGWDDAYVFRTHKGLLKWKFPD
MNSVDFLFEVGEENHQTLYLLDRKNRRQLQGAYVVFKGGEDPSEFNGKIMECSWNAQEEH
WEYMRIRTDKETPNAWNTYTKVMQSIQDNITEEEVLDEITEIIRLPMYAERISRESQAHQ
HARRK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacttaaatgcctctcctgttccagaagacgatgaagaggagcatatttttgaagag
caagctgaggaagatactgtagatggacatgtagagacagctgttgagattctgcgcaga
gaacgagaagagaggcgtcaacgtaggaaaagagaaaatcaaagtgaggagccaaagcgg
ccagcacaaataccaaagtacaatcctgttcctcaacaaagaaatcctagatcacatgat
agagcccagcaactacctactggttggttggattgccccaactctggaaagcgtattgtc
gccattatcccttctaaagttccacttggtgagtccttcaatgattttattgcacctgga
agaagatattcttggaaacaagtgcttcgccaacaaaaggtgctaggaaatgaaatttgt
atggtgattgatttgacaaatactgctcggtactatgacccatcagattggaagaagcaa
ggtattaaatattgcaagatagcttgcaagggacgagatgctgtacctgacaacgtttct
gtcaattgttttgtccatgaggtactacaatttatggagcgccacaaggggagcaatagg
aagtgtgctcttgttcattgtactcatggttacaatcggacagggttcatgattgttaat
taccttgttcggtcacatggatattcagttacagatgcactggatgtttttgctgatgca
cgccctcctggaatatataaaccagactatattgatgccttgttctcattttatcatgaa
agaaggcctaaaatattgacatgccctccaacaccagagtggaaaaggccttctgagctt
gatcttaatggtgaagcagtgtccgacagggaggacgatggtgtgaaaatagtggaaatg
gaaaatactgtgatgacaaatgatgatgtattaggagatgaaatccccacagatcagcaa
gtattattgcagaaaatctgctttacgaaactggaattgggaggagcaaatcttcatttt
cctggttcacaacctgtgtctcttgacaggtcgaatttacagctccttcgtcagagatat
tactatgcgacatggaaagctgatggaacaagatatatgatgcttataactttggatgga
tgctatttgattgacagaaaattttgtttccggagggtccagctgcggtttcctagaaga
tcttccaatcagggtccatctgacaaaactcatcacttgacattacttgatggtgagatg
attattgacactgtacctgaaactggcgagcagaaaagaagatatcttgtttatgatatg
atgttgctgaatggtgtttcagtcacaaagcttcccttttgtgaaaggtggaaattaatt
gagaaggaagttgttgagccccgtaatagtgatgtttcgaacaatcattcttacagatat
gacatggaacctttcagagtaagaagaaaggatttttggatgttatctgcggttataaag
gtgctgagggacttcattcccaagctttcacatgaggcagatggtcttatatttcagggg
tgggatgatgcatatgttttccggacacacaaaggccttctcaagtggaaatttcctgat
atgaactctgttgattttctatttgaggttggagaggaaaaccatcaaacactttatctt
cttgacagaaaaaatagacgacaattacaaggagcttatgttgtatttaaaggtggtgag
gacccttctgaatttaacgggaaaattatggagtgttcttggaatgcccaagaagaacac
tgggaatacatgcgcatccgaacagacaaggaaactccaaatgcatggaatacttacaca
aaggttatgcaaagtattcaggacaacattacagaggaggaagtacttgatgagattact
gagattatacgtcttccaatgtatgctgagagaatttcccgggagagtcaagcccaccaa
catgctcgtcgcaagtga
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