Amborella trichopoda: 18436708
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Entry
18436708 CDS
T02990
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atr01001
]
18436708
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18436708
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18436708
Protein kinases [BR:
atr01001
]
Serine/threonine kinases: Other
Other
18436708
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18436708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
LisH
WD40_Prp19
WD40_CDC20-Fz
LisH_PAC1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
18436708
NCBI-ProteinID:
XP_006846994
UniProt:
W1PN22
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MEVQPTTVDAQAQQNAEAEPESSNGRSEKDDLLSKAHNFVAKITSSQANPNSKVLHALAS
MMETQESRYVEESGRSSFSNGRASHNIGRLGNLIRDNDEFFELVSFKFLTESRYSTSVRC
AAARLLLACSTTWMYPHVFDESVLENVKRWVMDDKGEADGNNPVDMHMLRTYATGLLAVS
LSGGGQMVEDVLTSGLSGKLMRFLRTRVLGEINTSQKDSSFPTESKRFSNSTFSRGREEN
KGRTRLASDAIRVDVARPLDEGLADDQNIGRDRERSVSSKQAGVMDFFEDSRDETLEESV
RDETSRRRGNRAASRPEKPLTSPGSGIRLGGQVRNTKERNPVKSGDSRRMMDTKKDFNKT
DADASVTEREENDYSCKEFKVGTKDISDLVMKAFRAAEDEARAANAPHEAVKAAGEAAAE
LVKTTALEALKNTGDEEAALLAALTAVSTVVDAAKATEVSRESLTAIGESTSTKEPEKEE
ELEGYVILDAESLAQKMELYCIQCLEKLGEYVEVLGPVLHEKGVDVCLALLHHHSKDKQS
VKSLAMLSEVLKLICALAAHRKFASLFVDRGGMQKLLAVQRIPQTFTGLSLCLFAIGSLQ
AIMERVCALPPDVIHQVVELALQLMECSQDQARKNAALFFGVAFVFRAVLDSFDAQDGLQ
KMLNLLRTVASVRSGGNSGALGLSNLGALRNDRGPNEVLTAAEKQIAYHTCVALRQYLRA
HLLLLVDSLRPNKNRSAGRNIPSARAVYKPLDISNEAMDAVFLQLQRDRKLGPAFVRARW
PVVQKFLDFNGHTILLELCQAPPADRYLHDLAQYALDILQLVTLVPNSRKAVVTATLSNE
RVGMAVILDSANGAAYADPEVIQPALNILVNLVCPPPSLSNKPLSLTQSQTNAQASLPTQ
NERNGEQAVTEPGGSAPQGPATGNSSQSSGPSVASGVVGDRRISLGPGHGCAGLATTMEQ
GYRQAREAVRANNGIKVLLHLLHPRVVLPPASLDCIRALACRVLLGLARDDVIAHILTKL
QVGKLLSELIRDSGSQAPGMEHGRWQVELSQVAMELIAIVTNSGRASTIAATDAAAPTLK
RIERAAIAAATPITYHSRELLLLIHEHLQASGLNATAAALLKEAQLTPLPYLSVPTPVLH
QTAVQENLAVQFQWPSGHVSGGFLSGAPKPMLRIEDSGPKVDMSASGSKKKSVSFSPIFS
CQAKTQTASQQTPGSKSVSRASNSKNLSLSSRTPEVLSAPLENSRTPIIENLKTPILLPM
KRKLTDRESASSSPAKRFALTDSSAQSPVVPTPNLNSRKVGQISDASTFPVTPSSTHKNF
YWSSSTPNSMFLDNSEDSTPGLFAEPQPPNTERATLDSLVVQYLKHQHRQCPAPITTLPP
ISLLHPHVCPESSKSLDAPVNLAARLGTREFRTHYGGMHGHRRDRHYIFSRFRPWRTCRD
ESVLLTCITFLGNASRVATGCHTGELKVFDSNSGNLLESHHGHQSLVTLVQSTPRADDPK
MQLILSSGTSDVRLWDSSALSSGPLSSFEGCKAARFSHGGTVFGAVSAESARREVLLYDV
QTFNLEQKLTDTSVSPPVRGHVQSIVHFNPSDTMLLWNGILWDRRTSGPVHRFDQFSDYG
GGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTIITFNSGGDIIYAILRRNLEDITSA
AQPRRVRHPLFAAFRTIDAVSYLDIATVPVDRCVLDFATEPTDSFVGVVAMDDHEEMYAS
ARIYEVGRRRPTDDDSDPDDGAESDDDDDEDEDEDEDDDGADDDALVGPGGLGGDDDDDD
GDDDDEELEEGDLFSEGDDGDFDEDGIGGGILDIGTDDDDDEESQLLESFSSDDEGSLGR
LMW
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccagcctacaacagtggacgctcaagcccagcaaaatgcagaagcagagcct
gaatcttcaaatggtcgctctgaaaaggatgacttgctctctaaagcccataatttcgtg
gcgaagatcacttcgtcacaggcaaaccctaattctaaggtcctccatgccctggcttcg
atgatggagactcaagaatccagatatgttgaggagtcaggtcgttcttccttcagcaat
ggtcgggcctctcataatataggacgcctgggaaatttaattcgggataatgatgaattc
tttgagcttgtttctttcaaattcctcactgagagccgatattctacaagtgttcgttgt
gctgctgcacggttgcttcttgcttgttctacgacctggatgtatccccatgtttttgac
gaatcagtgcttgagaatgtcaaacgttgggtgatggatgacaaaggtgaagctgacggg
aataaccctgttgatatgcatatgttgaggacttatgcgactggacttctggctgtgtca
ttgagtgggggtggtcaaatggtggaagacgtgttaacatctggtttatcagggaaactt
atgaggtttcttcgcacccgtgtgctgggagaaataaacacaagccagaaagattctagt
tttccaacagagagtaaacgattttctaattctacattttcaagagggcgagaagagaat
aaagggagaacacggctagcatctgacgctattcgtgtggatgttgcaagaccacttgat
gaggggttagcagatgatcagaatattggcagggatcgtgagagaagtgtcagttccaaa
caagctggtgtgatggatttctttgaagactcaagagatgaaactttagaagaaagtgtg
agggatgagacttcaagacggaggggaaatcgtgcagcctcgcgtcctgaaaagcctttg
acctctccaggaagtgggatacggttaggaggacaggtgcgaaatactaaagagaggaat
ccagtgaaatctggagattctagaagaatgatggatactaagaaggatttcaacaagact
gatgcagatgcttctgttacagagagagaggagaatgattattcctgtaaagaattcaag
gttggtacaaaagacatatctgatctggtaatgaaagcatttagagctgctgaagatgaa
gccagagcggcgaatgcaccccacgaggcagtcaaagcagctggtgaagctgctgccgag
cttgtcaagactactgctttggaggcattgaaaaatacgggtgatgaagaagctgctctc
ttagctgcattgacagctgtttctactgttgtagatgctgctaaagcaactgaggtttca
agggaaagcctgactgctattggggaatcaacaagtaccaaggaacctgaaaaggaggag
gaactagaaggctatgttatccttgatgctgaatctcttgctcagaaaatggagctatac
tgcattcaatgtcttgagaagctaggagaatatgttgaggtcttgggtcctgttttgcat
gaaaagggagtggatgtctgccttgcattgttacatcaccattctaaggacaagcagtct
gtgaaaagcttggccatgctgtcggaagtgctgaaactcatctgtgctttagcggctcat
cgcaaattcgcgtcgttgtttgtggatcgtggtggtatgcagaagcttttagctgtccaa
agaattcctcagacttttaccggcctttctttatgcttgtttgccattggatctctccag
gcaatcatggaacgtgtctgtgctcttcctccagatgtcatccatcaagtcgttgagcta
gcacttcaacttatggaatgctcccaagatcaagctagaaaaaatgctgccttgttcttt
ggtgttgccttcgtctttagagcagtgcttgattcttttgatgcacaagatggtttacaa
aagatgttgaatcttctgagaactgtagcctctgtccgatctggtggtaattctggagca
ttgggtctatctaatttgggagctcttagaaatgatagaggtcctaatgaggttttaaca
gctgcggagaagcagattgcttaccatacatgtgtcgcattgcgtcaatatcttcgtgcc
catcttcttttgcttgtagattctcttcgtcccaacaaaaaccgaagtgcgggaaggaac
attccaagtgcaagggctgtctacaagcccctcgatatcagcaatgaagctatggatgct
gtgtttttacagctacagcgggaccgaaagcttgggccagcttttgtaagagcacgctgg
cccgttgttcaaaagttcctagatttcaatgggcataccattcttttggagttatgccaa
gccccacctgctgatcgctatctgcatgacttggcccagtatgccttggacattttgcaa
ttagttacactggtccctaacagtcgtaaggctgttgtgactgctactttgagcaatgaa
cgtgtgggtatggctgtcattttggactcggcgaatggtgctgcttatgctgatcctgag
gtaattcaaccagctctgaatatcttggtcaatcttgtctgccctcctccatctctgagt
aataaacccctctcacttacccaaagtcagaccaatgctcaagcatctttgcccacccag
aatgaacggaatggggaacaggctgttacagagcccggtggctcagctccccaggggcca
gcaactggaaacagttcacaatctagtggaccttctgttgcttcgggagtggttggagat
cgtaggatatctttgggacctggacatggttgtgctggccttgctacaactatggaacaa
ggatatcgacaagcgagggaggctgttcgagcaaacaatggaataaaggtgcttttgcat
ctcctccatccaagagtagtccttcctccagcctctctcgactgcattcgtgctctcgca
tgtcgagttctgcttggtttagccagagatgatgtaattgcacacatattgacaaagcta
caggttgggaaattgctttctgaacttattcgagattcaggcagccaggcacctggaatg
gagcatggaaggtggcaagtggaacttagccaagtggccatggaactcattgcaattgtg
acaaattctggtcgtgcaagtacaatagcagccactgatgctgctgcccctactctgaag
cgcattgagagagcagccatagctgcagctacgcctattacttatcattccagggagctg
ttactcctcatacatgaacacctccaggcatctggcctgaatgctactgctgctgcatta
ttgaaggaggcacagttgacaccattaccatatctctctgtaccaacgccagtcctgcat
caaacagctgtccaagagaacttagctgtgcagttccaatggccatcaggacatgtctct
ggtgggtttctctcaggagcaccaaagccaatgcttcgaattgaagattctggcccaaag
gtcgacatgtcagcaagtggttcaaagaagaaatcagtctctttctcacccatcttcagc
tgtcaagcaaaaactcagacagcatctcaacaaacacctggatcaaagtctgtttccaga
gcttcaaattcaaagaatctctctctatcttctaggacacctgaagttctatcagctcca
ctagaaaactcaaggactcccataatagaaaacttaaagacacccattttgttacccatg
aagcgaaagctaacagatagggagagtgcttcctcatcaccagcgaagcgtttcgccttg
acggattcttcagctcaatctcctgttgtccctacgcctaatcttaactctcgtaaagtg
ggtcaaatttcagatgcctcgacctttccagtcactccaagctctactcataaaaatttc
tattggagttcctcaacacccaactcaatgtttttagataattcagaagatagcactccc
ggcctctttgctgagcctcaaccaccaaacacagagcgagcaacccttgactcactggtg
gtacagtacctaaagcaccagcaccgacaatgccctgctccaattaccactttaccccca
atatctttgcttcatccccatgtttgccctgaatccagtaaaagccttgatgcaccagtg
aacctagctgctcgcttgggcacccgtgagttcaggacccactatggtgggatgcatggc
catcgtcgcgaccgccattacatcttcagccgcttccgcccttggcgtacctgccgagat
gaatctgtgctcctaacgtgcatcacattcctaggaaatgcatcgagggttgcgactggg
tgccacactggtgagctcaaggtctttgactcgaatagtggcaatttgcttgagagccac
catggccaccagtcgcttgtgacccttgtccagtcaacccctcgagccgatgacccaaaa
atgcagcttatcctatcatcgggcacaagtgatgtgaggctttgggactcatcagcctta
tcaagtggacctttgagctcattcgaggggtgtaaagctgcgaggttcagccatggaggt
accgtgtttggtgcggtgtcggcagagtcagctcggagggaggttctgttgtatgatgtg
caaacttttaatcttgagcagaagctcacagatacttcagtctcgcctccagttcggggg
catgtacagtcaattgtgcattttaacccttcagatacaatgttgctttggaatgggatc
ttgtgggatcgtcgcacttctgggccagttcatcggtttgaccagttttcagactacggg
ggcggtggttttcatccagctgggaatgaggtgatcataaattcggaggtgtgggaccta
aggaagttccggctactaaggagcgtgccctcattagaccaaaccatcatcaccttcaac
tcaggtggggacattatatatgccatccttcgaaggaaccttgaggacataacatcggca
gctcaacctcgacgcgtgagacaccccctctttgctgccttccgcacaattgacgcagtc
agctacttggacattgccactgttcctgttgatcgttgtgttttggactttgcaactgag
ccgactgactcatttgttggtgtggtggccatggatgaccatgaagagatgtatgcatca
gctcgaatctacgaagtcggtaggaggcgacctacagatgatgactctgaccctgatgat
ggggctgagtctgatgatgatgatgatgaggatgaggacgaggatgaggatgatgatggg
gctgatgatgacgcattggtaggacctggggggcttggtggtgatgatgatgatgatgat
ggggatgatgatgatgaagagcttgaggagggggatttatttagtgaaggggatgatggg
gattttgacgaggatggcattgggggagggatattggatatcggaactgacgatgatgat
gatgaagagagccaattgttggagtcatttagtagtgacgatgaggggtctctggggcgc
ttgatgtggtga
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integrated database retrieval system
