Amborella trichopoda: 18436720
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Entry
18436720 CDS
T02990
Name
(RefSeq) ion channel DMI1 isoform X1
KO
K21866
ion channel POLLUX/CASTOR
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18436720
Transporters [BR:
atr02000
]
Other transporters
Pores ion channels [TC:
1
]
18436720
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Ortholog
Paralog
GFIT
Motif
Pfam:
Castor_Poll_mid
TrkA_C
Motif
Other DBs
NCBI-GeneID:
18436720
NCBI-ProteinID:
XP_006847006
UniProt:
W1PF26
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MMPNSLDNNRGHGSESPPLLKRTRTLDHSFLNGPLRSAVRRLHSSPPNPNRNSLQNPNPN
SPQSSDPIYPQNISPSFLDNPNSNPVVRDLDHSDSPFLARDWCYPSFPQPPKEPPLSSKP
LKPKRVEEDENTILAVPELSKFPSKSPESNRHTLPDSNDKSGVAPKVAVKEKRQTFGKCS
CSMMVNSKQVNSEPLALFLLKKIFVLRSLFMSLLLVSCILCISYAASMHVKVADLEEELS
NLRRVCSKQETEILGSGQVGELHYGFPSGFGDLNSRKIALYTVLVTLVTPFLFFKYLDYL
PRVYTTSKNGRCNGEEVPLKKRIAYRVDVCFSLYPYAKLLALLSATIVLIAFGGLALYAV
SDGSLSEALWLSWTFVADSGNHAEMVGTGPRIVSVSISAGGMLIFAMMLGLVSDAISEKV
DSLRKGKSEVIERNHILILGWSDKLGSLLKQLAIANQSLGGGVVVVLAERDKEEMEMDIA
KLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADLSDARALRIVLSLTG
VKEGLKGHVVVELSDLDNEPLVKLVGGEHIETVVAHDVIGRLMIQCALQPGLAQIWEDIL
GFENAEFYIKRWPQLDGMRFEEVLISFPDAVPCGVKVVANGGKIVLNPDDNYILKEGDEV
LVIAEDDDTYAPGPLPEVRRGFHPNVSSPPKFPEKILFCGWRRDIDDMILVLEAFLSPGS
ELWMFNEVPEKERERKLTDGGLDLSGLENLTLVHREGNAVIRRHLESLPLETFDSILILA
DESLEDSIVHSDSRSLATLLLIRDIQSKRLPCREAKSIPLRYMGFSHSSWIREMQQASDK
SIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNELY
IRPAEFYLFDQEELCFFEIMVRGRQRQEIVIGYRLASAERAVINPECKMKPQKWSLDDVF
VVIAQEE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgaatagcttggataataatcgcggccatggctctgaaagtccccctctccta
aagagaacccgcactcttgatcacagcttcctcaacggtcctcttcgctcagctgtgcgt
cgactccatagctcccctccgaacccgaaccgtaattctctgcaaaaccctaaccctaat
tctcctcaatcttcagaccccatttatcctcaaaatatcagtcccagttttctggataac
ccgaactctaatcccgtggttcgagatcttgatcattctgattctccgtttcttgctcga
gattggtgctatccttcatttcctcagcctcccaaggagcctcctctctcctctaagcct
ttgaagcccaaaagggttgaagaagacgaaaataccattttggccgtgccagaattgtcc
aaatttccctcaaaatcgccagaatccaacagacacacattgccggattccaatgacaag
agtggggtggctccgaaagtggcagtcaaggagaagagacaaacttttggcaagtgctcg
tgttccatgatggtgaattcgaagcaagttaattccgaacctttggctttgtttctgcta
aagaagatttttgtgctcagatcattgttcatgtccctgcttcttgtgtcttgtatatta
tgtatctcatatgcagcatccatgcatgtcaaagttgcagatcttgaggaagagctttct
aatcttcgtagggtatgtagcaaacaggaaactgaaattcttggcagtggtcaagttgga
gagcttcattatggttttccttcaggatttggtgaccttaacagtcgaaagattgctctg
tacacggttttggtaactctagtcactccatttttgttctttaaatatcttgactatctt
cctagagtgtatacaacttcaaagaatgggaggtgcaatggcgaagaggttcctttgaaa
aagagaattgcatatagagtggacgtatgcttctctttgtatccctatgcaaagcttctt
gcccttctttctgcaacaatagtgctgattgcgtttggtgggttagcactatatgcagtg
agtgatggtagcctctctgaagctttatggctttcatggacttttgtggcggattcagga
aatcatgctgaaatggttggcactggtcctcgtattgtttctgtgtctatcagtgctggg
ggtatgctgatttttgccatgatgcttgggcttgtttctgatgcaatatcagaaaaggtg
gattcattgcgaaaaggaaagagtgaagttattgagagaaaccatattttgattcttgga
tggagtgacaaactgggttcattgttgaagcagttagcaatagcaaatcaaagcctaggt
ggtggtgtagttgtagttcttgctgaaagggacaaggaagaaatggagatggacatagca
aagctagaatttgacttcatgggaacatctgttatttgtagaagtggtagtcctctgata
cttgctgatttgaaaaaggtttctgtctcaaaggctcgtgccattattgtgttagcatct
gacgaaaatgcggatctgagtgatgctcgtgctttgaggatcgttttgagcctcactgga
gtcaaagagggtttgaaagggcatgttgtagtagaactgagtgaccttgacaatgagcca
ttagtaaagctcgttggaggagagcatattgaaacagttgttgctcatgatgtgattgga
cgcttgatgatacaatgtgcactgcaacctggccttgcgcagatatgggaggatatttta
gggttcgagaatgcagaattttatatcaaaaggtggcctcaattggatggtatgaggttt
gaagaagttctgatttcattccctgatgcagttccttgtggagtcaaggtagtggcaaat
ggtggaaaaattgttcttaatccagatgacaattacattctaaaggaaggtgatgaagtc
cttgttattgcagaggatgatgatacctatgcccctggccctttgcctgaggtaaggagg
gggtttcatcctaacgtttccagccctccaaagttccccgagaagatactattttgtggt
tggcgtcgtgacatcgatgacatgatattggtgctagaagcatttttatctccaggttca
gaactatggatgttcaatgaggttcctgagaaagaaagagagagaaaactaactgatggt
gggctggatctatctggattagagaatctaacgcttgttcatagagagggaaatgctgtt
atacgtcgacacctggaatctcttcctttagagacatttgactcaattttgattcttgca
gatgagtcattggaggattctattgttcattccgattctcgttcactagctacacttctt
ctcattcgtgatattcagtctaaacggcttccatgcagagaggcaaagtccatccctttg
cgatatatgggattttcacatagctcttggattcgagaaatgcaacaggcctctgacaaa
tcaatcatcataagtgagatcttggattctaggactagaaaccttgtatctgtatccaga
attagtgactatgtattgtctaatgagcttgtcagcatggcattggcaatggttgctgag
gacaaacaaatcaatcgtgtccttgaggaactctttgctgaagaggggaatgagttatac
atccgacctgcagagttttatttatttgatcaggaagagctatgcttttttgaaatcatg
gttcgtgggcggcagaggcaggagattgtaattggctatcgacttgcctcagcagaacgt
gcagtgatcaaccccgaatgcaagatgaagccccagaagtggtcactagatgatgtattt
gtggtcattgcacaagaggaatga
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