Amborella trichopoda: 18436747
Help
Entry
18436747 CDS
T02990
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atr
Amborella trichopoda
Pathway
atr00061
Fatty acid biosynthesis
atr00071
Fatty acid degradation
atr01100
Metabolic pathways
atr01212
Fatty acid metabolism
atr04146
Peroxisome
Module
atr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18436747
00071 Fatty acid degradation
18436747
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18436747
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atr01004
]
18436747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18436747
Enzymes [BR:
atr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
18436747
Lipid biosynthesis proteins [BR:
atr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
18436747
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of breast milk
18436747
Exosomal proteins of breast cancer cells
18436747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
CC190
AMP-binding_C
SpoIIM
Motif
Other DBs
NCBI-GeneID:
18436747
NCBI-ProteinID:
XP_006847032
UniProt:
W1PKP5
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MSPYLVGIFVPLLFSIALENVRKKKKRGLPVDVGGEPGYAIRNYRFPSPVETIGKGVSTI
ADLFEKSCTKYANKRLLGSRKLIARETEVSEDGRSFEKLHLGSYEWLSYAEAFERVCNFS
SGLLQLGHGKQERAAIFAETQSEWLIALQGCFRRNVTVVTIYASLGEEALAHSLNETEVS
TVICGHKELKKIIDISGQLDTVKRVVYIEDGAFSADVALPGNSSSWAVTSFLDVEKLGRE
NPIDAELPVSADVAVIMYTSGSTGLPKGVMMTHGNVLATVAAVMTIVPGLGSKDVYLAYL
PLAHILELAAEAIMVAAGSSIGYGSPLTLTDTSNKIKKGTKGDASALGPTLMTAVPAILD
RVRDGVRKKVDTKGGISKILFDIAYSRRLSAINGSWFGAWGLEKLLWTIVVFRKVRAVLG
GHIRFLLSGGAPLSGETQRFINICLGAPIGQGYGLTETCAGGTFSEYDDPSVGRVGAPLP
CSFIKLIDWPEGGYLTSDSPMPRGEIVIGGPNVTLGYFKNKEKTDEVYKVDERGMRWFYS
GDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPCVDNIMLHADPFHSYCV
ALVVPSPHALENWAQKQGITYNDFAELCEKEETTKEVYGSLVKAAKNAHLQKFEVPAKIK
LLPDPWTPESGLVTAALKLKREAIKKAFAEDLSSLYA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatatcttgttggtatctttgtgcctcttcttttttctattgcattagaaaat
gtgagaaagaaaaagaagaggggtttgcctgttgatgttgggggagaacctggttatgca
attcggaactaccgctttccttctccagtggaaacaattgggaaaggagtttctacaata
gctgatctctttgagaaatcatgcacaaagtatgcaaataagcgattattggggtctcgc
aagctcattgcaagggagactgaagtcagtgaagatggcaggtcttttgaaaagcttcat
ttgggtagctatgaatggctaagctatgctgaagcttttgagcgtgtgtgcaacttctcg
tctggtttactacagcttggccatggtaagcaggagcgtgctgcaatctttgctgagaca
caatcagagtggctcattgccttgcaggggtgcttcagacgcaacgtcacagtcgtcact
atctatgcttcactgggggaggaggctcttgcccattcactaaatgagacggaggtttca
acagtaatatgtggacacaaagagcttaaaaagataattgatataagtggacaacttgac
acagttaagcgtgttgtctacatagaagatggagccttctcagctgacgttgccttgcct
gggaatagttctagttgggctgttacatcctttcttgatgtagaaaaattaggccgagag
aatcccattgatgcagagttaccagtctctgctgatgttgcagtaataatgtatacaagt
ggtagtactggtttgccaaagggagtcatgatgactcatggaaatgtcctagcaacagtt
gctgctgtgatgaccattgttccaggccttggcagcaaagatgtttatttggcataccta
cctctggctcatatacttgaattggcagctgaggcaataatggttgcagccggaagttca
ataggatatggatcacctcttacactaactgatacatcaaacaagatcaagaagggaaca
aagggcgatgcctctgcgttggggccaacacttatgactgctgtaccggcaatcctggat
cgtgttcgagatggtgtaaggaaaaaggttgacacaaaaggtgggatatcaaagattcta
tttgacattgcatatagtcgtagattatctgcaataaatggaagttggtttggcgcatgg
ggactagagaaacttctatggactatagttgtttttagaaaggttcgagcagttttagga
ggccacatccggttcttgctttctggaggtgctcccctttctggagaaacgcagaggttt
ataaacatatgccttggggctccgattggccaagggtatggacttactgagacttgtgct
ggtgggacattttctgagtatgatgatccatctgttggtcgtgttggtgctccacttcca
tgctccttcattaagttgattgattggccagaaggtggatatttgacatcagattcacca
atgccacgtggggagatagtcatcgggggtccaaatgttactctcggatattttaagaac
aaagagaaaacagatgaagtttataaggtagatgagaggggaatgaggtggttttatagt
ggtgacattgggcggtttcaccctgatggctgccttgagattattgaccgcaaaaaagat
atagtgaaacttcaacatggagaatacgtttctctaggaaaggttgaagccgccctgatt
gtgagtccttgtgtcgacaacatcatgctgcatgctgatccatttcacagttactgtgtg
gctctagtggttccatctcctcatgctctagaaaactgggcacaaaagcaaggaatcact
tataatgattttgctgaattgtgtgagaaagaggagaccaccaaagaagtttatggttcc
ctagtaaaggctgccaagaatgctcaccttcagaagtttgaggtccctgcaaagatcaag
ttgcttccagatccatggacaccagaatccggcttggtcactgcagctctcaagctcaaa
agagaagccatcaagaaggccttcgcagaggatctttctagtttatatgcatga
DBGET
integrated database retrieval system
