Amborella trichopoda: 18436827
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Entry
18436827 CDS
T02990
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18436827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18436827
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
18436827
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
18436827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18436827
NCBI-ProteinID:
XP_020524537
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MPTDRRSSRIGTTASSDPRSTALERLKALRDGTVQKTPEIKLAEPIYDSLPEDEYARLVA
ERKASAKEFIVDDNGLGYGDEGEEEDWGKDQLPPSSDEEDEGFQRKRGLVSEKRKKEKRE
KDEAKQSSSFSAAAALMGKQRLTSMFTSNVLKKREEKGGVRGVSAEAIIEDVLMEFAPDE
TDRERRRRRLGTKASLPSSDAMLRPVECETVSINKNSKSGIDKLPLVSSMVLGNERLGPD
TDDTGMSMDTHAETSPHLEPELASGANDCQDPDASHNNLLREGPIVEKGKVGLLVSERNA
KIEKGTVEDKVLLNAKVNIESNSMPTATAGWQAVSQGEKVNGGQNGEVSELPVNYEEKTE
FSLDPDGSLPFYIIDAYEEIYGANVGTLYLFGKVKSGDAYLSCCVVVKNLLRCVYAIPTG
SVFKGNAVAELESALKDSRITHTTFRTKLQDMATGLKNELSKRLLDLNVSTFSMTPVKRS
YAFEQSGVPIGKHYVLKISYPYKDSPLPSDLRGGHFSALFGTNTSALELFLVKRKIKGPC
WLTISKFSSCPALQRVSWCKMEVVVDCPKDVNIATSSGAAREIPTVTTAAINLKTVINQQ
KNMNEVVCASIVCYRNVKIDSPSEWKRPDSHFTVIRKLDGDVFPLGFTKEADERNKKAGN
IVLVCEGSERALLNRFMTELHKLDSDVLVGHNISGFDLDVLLHRAQDCKVPSNMWSKLGR
LKRSSMPKLTKGNNLFGSGTSPGVLSCISGRLLCDTYLASRDLLKEVSYSLTQLAKTQLR
KDRKEIAPLDIPLMFQTANSLLELVECGETDAWLSLGLMFHLSVLPLTRQLTNISGNLWG
KTLQGARAQRVEYLLLHAFHSKKYIVPDKAIHKKITSTKRRMAGGAEEGDLNDPNVDDYN
FDGDDQHNDKEKRKKGPAYSGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVE
RTSDGSIPSLPSSRTTGVLPELLKNLVERRRNVKSWIKKTSNIYKIQQLDIQQQALKLTA
NSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIHSGL
DDISEAKAIAVKVIKEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVLFNKDGSLYEVI
ERKGLDIVRRDWSLLAKELGDFCLNHILSGGSCEDVVEAIHGHLMKVQEEMRNGEVELDK
YVITKSLTKPPEDYADARNQPHVQVALRLKQSGHRIGCSAGDTVPYIICCQPGSGSGSSA
GIAQRARHPDELKRDNEDWMVDIEYYLSQQIHPVVSRLCATIQGTSPSRLADCLGIESSK
FQHKIDESVNRDSSSLLLCTADDEDRYRGCEPLWISCPSCSASFECPTVSSLITALASQK
KTESQTQEEPGGNFWLRLRCSRCPDEGDGSRISPAMIANQVKRQAEKFISKYYDGLMMCD
DEMCKHTTRTLNLRVIGESERGTVCPNFPRCNGHLIKEYTEAELYRQLSYYCHVLDSARF
IGKLQLEYSMRIAIEKHLASIRPLVEPASSTIQRIRESCAYGWVRLKDLCVSV
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatcgtcgcagtagtcgaataggtaccacagcctcatcagacccgcgctcc
acggcccttgagcgcctcaaggccctgcgtgacggcacggtacagaaaaccccagaaatc
aaattggcagaaccaatctacgacagtcttcctgaagatgaatatgcccgcttggttgca
gagcgcaaagcttctgcgaaggaattcatagtggacgacaatggtcttggttatggagat
gaaggggaagaagaagattggggaaaagaccagcttcccccttcttcggacgaagaagat
gaggggtttcagagaaagaggggcttggtttcagagaagaggaagaaggagaagagagag
aaagatgaagcaaagcagagctcgtctttctctgctgctgctgctttaatgggaaagcag
aggctcacttccatgtttacttcgaatgtgttgaagaagagggaggagaaggggggagtg
aggggggtgagtgctgaggccattatagaggatgtgttaatggaatttgcgcctgacgag
actgacagagagaggaggagaaggcgattaggtacaaaggcttcattaccatcatctgat
gcaatgctgcgacctgttgagtgtgaaacagtttctattaacaaaaattctaaatctggg
attgataagttacccctagtttcaagtatggttttggggaatgagcgcttgggtcctgat
actgacgatacaggcatgagcatggatactcatgccgagacttcacctcacctggaacca
gagctggcttctggtgctaatgattgtcaagatcctgatgcatctcataataatttactt
cgagaggggcccatagtggaaaaaggaaaggttggtttgcttgtttctgaaagaaatgct
aaaatagagaagggaacagttgaagacaaagttttgcttaatgcaaaggttaatattgag
agcaattctatgcccactgctactgctggttggcaagctgtatcacaaggggagaaggtg
aatggtggtcagaatggggaagtttcagaactcccagtaaattatgaagagaagacagag
ttttctttggacccagatgggtcactacctttctatataattgatgcatatgaggagatc
tatggtgcaaatgttggtactttgtacctctttggaaaggttaaatcaggtgatgcatat
ctcagttgttgtgtagttgtaaaaaatttactgagatgtgtctatgccatccctactggt
tcagtttttaaaggaaatgcagtcgcagagcttgaaagtgctttgaaggactccagaatc
acacatacaacatttcggaccaagctgcaagatatggcaactggattaaagaatgaatta
tccaaaagactgttggatcttaatgtgtcaacttttagcatgactcctgtgaagaggagc
tatgcatttgaacaatctggtgtacctattggcaagcattatgttcttaagatcagctac
ccatacaaggattcacctcttccttccgatttaagaggaggacatttttctgctcttttt
ggtaccaataccagtgctttggagctctttctcgtaaaaaggaaaataaaagggccctgt
tggctcactatatcaaaattttccagctgtcctgctctacaacgggtgagctggtgcaaa
atggaagttgttgttgactgtcctaaggatgtgaatatagcaacttcttcaggtgctgca
agagagatccctaccgtgacgactgcagcaataaatttgaaaacagttatcaatcaacag
aaaaatatgaatgaagttgtttgtgcatctattgtttgttaccgcaatgtcaagattgat
agcccttcagaatggaaacgacccgatagccattttactgttattcgcaagcttgatggt
gatgtgttccctctgggatttaccaaggaagctgatgaacgaaataaaaaggctgggaat
attgtgctagtatgtgagggcagtgaacgtgccttgttaaaccgctttatgactgaatta
cacaaattagacagtgatgttttggttgggcacaacatttctgggtttgatcttgatgtt
cttcttcaccgagcacaggattgcaaggtgccgagtaatatgtggtccaaacttggccgt
ctcaaacgctcttccatgccaaaacttacaaaaggaaataacctatttggaagtggaact
agtcccggagtgttatcctgcatttctggtcgacttttatgtgatacatatttagcctca
cgtgatcttttaaaggaggtgagttactctttgacacaacttgccaaaactcaattgcgg
aaggaccggaaagaaattgctccacttgatattccattgatgtttcaaacagcaaactcc
cttcttgaacttgtggaatgtggggagactgatgcttggctatctttaggattgatgttt
catttgagtgtgcttccattaacacgccaactgactaatattagtggtaatctctggggg
aagacgctccagggagcgagggcacagagagtggaataccttttattgcatgcttttcat
tcaaagaaatacattgtccctgacaaggctattcataaaaaaatcacctcaactaaacga
agaatggctggtggcgcagaggaaggagacctcaatgatccaaatgttgatgattacaat
tttgatggtgatgatcaacataatgataaggaaaaacgtaaaaagggtcctgcctactct
ggtggtctggtgttggaacctaagaaaggtctttatgacaagtatattctattgctggac
ttcaatagtttgtatccatccatcatccaggagtacaatatctgcttcaccacagttgaa
cgaacaagtgatggttcaattcctagtttaccatctagtagaaccactggagttctacct
gagttattgaaaaatttggttgagaggaggagaaatgttaaatcgtggatcaagaagacc
tccaatatttacaagattcagcagcttgatattcaacaacaggctttgaagctaactgca
aacagtatgtatggttgcttgggcttctccaattcaaggttttatgcaaagccactagca
gagctcataacactacagggacgggagatcttgcagagcactgttgaccttgtccagaat
aacttaaatttggaggtaatttatggagatacagactctattatgatacacagtggactt
gatgatatttcagaagccaaagctatagccgtaaaggtcatcaaagaggtcaacaagaag
tataggtgtttagaaatagatcttgatggattatacaagagaatgctccttctcaagaaa
aagaaatatgccgctgtcaaagtgctatttaacaaggatgggtcactgtatgaggtcatt
gaacgaaagggtcttgacatagtacgtcgtgactggagtttgctagcaaaggaactaggg
gatttctgtctcaaccatatattatctggaggatcatgtgaagatgttgtagaagcaata
catggccatctaatgaaggtgcaagaagagatgagaaatggtgaagtcgaacttgataag
tatgtgattacgaaatccttgactaaaccaccagaggactatgcagatgcgagaaaccaa
cctcatgttcaggttgcattgagattgaagcaaagtgggcatcgcattggttgctctgcc
ggtgatacagttccttatattatttgctgccagccaggttctggatctggttcttctgct
ggaatagctcaaagagctagacatcctgatgaactgaaaagggacaatgaggattggatg
gttgatatcgagtattacttgtcacagcagattcatcctgtggtatcacgactttgtgca
acgattcaaggcaccagtccttcacgtctggctgattgtcttgggatcgagtcatccaag
ttccaacataaaatagatgaatcagtgaacagagattcttctagtttgcttttatgtaca
gctgatgatgaagacagataccggggttgtgagcctttgtggatatcatgtcccagttgc
tctgctagttttgagtgccccacagtgtccagcttaataactgctctagcttctcaaaaa
aagactgaatctcaaacacaagaagaaccaggtggtaacttctggctccgattgcgctgt
tcaagatgcccagatgagggtgatggaagcagaatatctccggccatgatagcaaaccag
gtgaagaggcaggcagagaagttcatctccaagtattatgatggacttatgatgtgcgat
gacgaaatgtgtaagcataccactcgtactctgaatctgcgggtgattggtgaatcagag
agaggaacggtatgtccaaactttccacgttgtaatggccatctcataaaagagtataca
gaggcagagctatacaggcaactctcatactactgtcatgtgttggattctgcacggttt
atcggaaagttgcagttggaatacagtatgagaatagcaattgagaagcaccttgcaagc
atccggcccttagtagagccagcatcctcaacaatacagagaattagggagagctgtgca
tatggttgggtccggctcaaggacctgtgcgtgtctgtttga
DBGET
integrated database retrieval system
